Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20quina_20[genbank_20GCA_5F000826445.1_202015-01-07] 60,490 sequences; 83,589,038 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq58066 293 2e-74 seq41484 206 2e-48 seq57096 203 3e-47 seq41485 203 3e-47 seq53831 163 2e-35 seq39829 149 5e-31 >seq58066 Length=10012 Score = 293 bits (324), Expect = 2e-74 Identities = 929/1425 (65%), Gaps = 40/1425 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| |||||||||||||| || || || | | ||| | ||| |||||||||||||| Sbjct 5496 ATCGACGGTGAACTGGATCGCGTTGGCGGCGGGCCGGGTGCGAAGGTAGTACATGCCGGT 5555 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 ||||||||| ||||| || ||||| |||||||| | | || ||| | ||||| Sbjct 5556 CTTGAGGCCCTTGCGCCAGGCGTAGAAGTGCATCGAGGTGAGCTTGGCAAACGAGGGCTC 5615 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCA-CGATCTGCAGCCA 65255 | ||| | | || | |||||| ||||| ||||||| | | | | ||||| || |||| Sbjct 5616 GCCCATGTAGACGTTGAGCGACTGGCTCTGGTCGATGT-AGGCCGAGCGATCGGCGGCCA 5674 Query 65256 TGTCAATGAT-ACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTC 65313 |||| ||||| ||| || || | |||||| ||||||||||||| || | | | || Sbjct 5675 TGTCGATGATGACG-CGCTGCGGGAGCTCCCACACGGTCTTGTACA-GCTTCTTGATGTC 5732 Query 65314 AATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGC-- 65371 || |||||||| ||| |||||| || | || |||| | | | | || | Sbjct 5733 GTCGGGGATCTCCTCGATGCGCTGGACCGAGC--CGTTGTGCGA-GACGAGCTTGTTCTT 5789 Query 65372 -ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGAC 65430 | || ||||| | || | || | | | | ||| |||| ||| Sbjct 5790 GAGCGCGGGCGACCAGAGGCCGCGCTGCTGGAGCTCGCGCAGAAGGTGCTCGTTGACGAC 5849 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 ||| ||||||| || | ||| ||| |||||||||| |||| ||| |||||| | Sbjct 5850 GGTGAAGTCGCCGGCGAGGATACGGCGGGTGTAGATGTTGGTCGTGTAGGGCTCAAAGCA 5909 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 || ||||||| || || || | || || || || |||||||| || || | | || Sbjct 5910 CTCGTTGTTGCCCAGGATCTGCGAGGTCGAGGCCGTGGGCATGGGCGCCACGAGGAGCGA 5969 Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTT 65610 ||| |||| |||| | | |||||| || | | |||||| |||| | || Sbjct 5970 GTTGCGCAGACCGTGCTGGGCGATGTTGGCGCGGAGCGTGGCCCAGTCCCAC--CTGT-- 6025 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 || || || | ||| ||| | || | || || | || | || || || || Sbjct 6026 -CCGACGGCA-CGACGCCCCAGAGGTCGGGCTGGAGCTTGCCCTTGGACGCGGGCGAGCC 6083 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 | | | | ||| ||||| ||| || || | || | || ||||| Sbjct 6084 CTCGTAGGTCTGGTAGGTGCCCTCGACCTGCGCGAGCTCGTTCGAGGCGACCAGGGCGGC 6143 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 | || ||||||||||| ||| || || || || || ||||| |||||||| |||| Sbjct 6144 GTAGTAGATGGTCTCGAAGATGGCGCGGTTGAGCTCGCGGGCCTCGTCGCTCTCCCACGG 6203 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 | ||| | | || ||||||||| || || ||||| || |||||||| | || Sbjct 6204 GTGGCGCATGATCATGAAGACGTCGGCCAGGCCCTGCACTCCGATGCCGATGGGCCTGTG 6263 Query 65851 ACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 |||| || || | ||||| || || |||||||| ||||| ||||| | || Sbjct 6264 GCGCATGTTCGAGTTGCGGGCCTCGGGCACGGGGTAGTAGTTGATGTCGATCACCTTGTT 6323 Query 65911 CAAATTGCGTGTCACCACATGCACGATACGTC--GCAATTGTTCGAAATCAAAATGTTTA 65968 | || || ||||| | |||| ||||| ||| | | | ||||| | Sbjct 6324 AAGGTTCTTGGTGACCACCTTCACG--ACGTCGTGCAGCTTCTGGTGGTCAAACT----- 6376 Query 65969 GGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAG 66028 | || | | || || |||||||| || || || || || |||||||| Sbjct 6377 CGCCGTTGGTGA-TG------------AACTTGGGCAGCGCGAGCGAGGCCAGGTTGCAC 6423 Query 66029 ACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT 66088 || || | |||||| || | || |||| ||| | || |||||||| || | | Sbjct 6424 ACGGCCACCTCGTCGGGCGACGTGTACTGGACGACCTCCGTGCACAGGTTCGACGACTGG 6483 Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 |||||||| | | ||| || || ||||| ||||| || |||||||||| |||||| Sbjct 6484 ATGGTGCCGAGGTGCTGCTGGTTGGACTTGCCGTTGCAGGCGTCCTTGTACAGCATGTAG 6543 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || ||||||||||| | || ||||| | ||||||| ||| || | | ||||| ||| Sbjct 6544 GGCGTGCCGGTCTCGATCTGCGACTCGAGGATGGCGAACCACAGCTCCTGGGCCTTGACC 6603 Query 66209 GTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268 || ||| | || | | ||||| | ||||| | ||||| | ||| Sbjct 6604 ACGCGGCGCGCGCGGCCCTCCTGCTCGTAGCGCTCGTACTTCTCCTCGAACTCCTTGCCC 6663 Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 || ||| |||| | || || || || || | |||||||| || || || Sbjct 6664 CACGAGTCGAACAGGCCGGGGGCCTCGTTGGGGCAAAAGAGCGACCAGTCGCCGCCCGTC 6723 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || || || ||| || || || || ||||| ||| |||||||||||||||| || || Sbjct 6724 TCCACGCGCTTCATGAACAGGTCGGGAATCCACAGGCCGTAGAAGAGATCGCGGGCGCGG 6783 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 | |||||| ||||||| || || || ||||||||| ||||||||||| || ||||| Sbjct 6784 TTCTCCTCCTTGCCGTGGTTCTTCTTCAGGTCGAGGAAGTCAAAGATGTCCGCGTGCCAG 6843 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCT 66493 || || |||||||||||||| | ||| | || || || || ||| Sbjct 6844 GGCTCGAGGTAGATGGCGAAAGCACCCTTGCGCTTACCACCTCCT 6888 >seq41484 Length=9505 Score = 206 bits (228), Expect = 2e-48 Identities = 406/590 (69%), Gaps = 9/590 (2%) Strand=Plus/Minus Query 61054 CGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAA 61113 || ||||| ||||||||||| | || || ||| |||||||| ||||| || Sbjct 944 CGATTCGTGCTGTTCCCCATCCGCCACCAGCGCATCTGGGAGATGTACAAGAAGGCCGAG 885 Query 61114 GCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG-CG 61172 || ||||||||||||| ||||| |||||| || | |||||||| ||||||| || Sbjct 884 GCCTCCTTCTGGACGGCCGAGGAAGTCGATCTGAGCTCCGACATGAAGCACTGGGAATCG 825 Query 61173 TTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGA 61232 | | | | || || || ||||| || || || ||||| ||||| || ||| || Sbjct 824 CTCAACAA-CGACGAGAGGCACTTCATCAAGCACGTCTTGGCCTTCTTCGCGGCTAGCGA 766 Query 61233 CGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGC 61292 ||| ||||| |||||| | | || ||| | |||||||||| ||| | ||||| Sbjct 765 CGGCATCGTGGCCGAGAATCTCGCCGGCCGCTTCATGAAGGAGGTGCAGGTGCCCGAGGC 706 Query 61293 GCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGT 61352 ||| || ||||||||||| || || ||||| ||||| ||||||| ||||||||| | Sbjct 705 GCGCTGCTTCTACGGCTTTCAAATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCT 646 Query 61353 TCTCATCGATACGTACATCAGGGA-GCGGGCGGAACGTGAACGATTGTTCAATGCCATCG 61411 || ||||| || ||| ||| ||| ||| || | | || || | ||| ||||||| Sbjct 645 CCTTATCGACACCTACGTCAAGGACTCGGTCGAGAAG-GACCGCCTCTTCCGCGCCATCG 587 Query 61412 AGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATC-ACCAGTACA 61470 |||| | || |||| ||| ||| || || ||||| | || |||||| || || | Sbjct 586 AGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG 527 Query 61471 ACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCA 61528 || | || || | || || | | | ||| || | |||||||| | || ||| Sbjct 526 GCGTCGAGACCTTCGCCGAGCGTCTCGTCGGATTCGCCGCCGTCGAGGGCATCTTCTTCT 467 Query 61529 GTGG-ATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACC 61587 || | | | || | | ||||| ||| | ||||| ||||| || |||||||| || || Sbjct 466 CCGGCAGCTTCTG-CTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGCCTCGCC 408 Query 61588 TTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 ||||| || ||| |||| ||||| |||||| | || || || || || Sbjct 407 TTCAGTAACGAGATGATCAGCCGCGATGAGGGCCTCCACTGCGACTTCGC 358 >seq57096 Length=4203 Score = 203 bits (224), Expect = 3e-47 Identities = 380/548 (69%), Gaps = 9/548 (2%) Strand=Plus/Minus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| ||||| || || ||||||||||||| ||||| |||||| || | ||| Sbjct 4172 ATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAAGTCGATCTGAGCTCCGAC 4113 Query 61156 ATGAATGACTGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 ||||| ||||||| || | | | | || || || ||||| || || || ||||| Sbjct 4112 ATGAAGCACTGGGAATCGCTCAACAA-CGACGAGAGGCACTTCATCAAGCACGTCTTGGC 4054 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 ||||| || ||| ||||| ||||| |||||| | | || ||| | |||| Sbjct 4053 CTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCCGGCCGCTTCATGAAGGA 3994 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 |||||| ||| | |||||||| || ||||||||||| || || ||||| ||||| |||| Sbjct 3993 GGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATCGCCATCGAGAACATCCA 3934 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGGCGGAACGTGAAC 61393 ||| ||||||||| | || ||||| || ||| ||| ||| ||| || | | || | Sbjct 3933 CTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGACTCGGTCGAGAAG-GACC 3875 Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453 | | ||| ||||||||||| | || |||| ||| ||| || || ||||| | | Sbjct 3874 GCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGA 3815 Query 61454 ATTGGATC-ACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510 | |||||| || || | || | || || | || || | | | ||| || | | Sbjct 3814 AGTGGATCAACAAGGAGGGCGTCGAGACCTTCGCCGAGCGTCTCGTCGGATTCGCCGCCG 3755 Query 61511 TCGAGGGTGTATTTTTCAGTGG-ATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||||| | || ||| || | | | || | | ||||| ||| | ||||| ||||| Sbjct 3754 TCGAGGGCATCTTCTTCTCCGGCAGCTTCTG-CTCCATCTTCTGGCTCAAGAAGCGTGGC 3696 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || |||||||| || ||||||| || ||| |||| ||||| |||||| | || || Sbjct 3695 CTCATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCGATGAGGGCCTCCACTGC 3636 Query 61630 GATTTTGC 61637 || || || Sbjct 3635 GACTTCGC 3628 >seq41485 Length=1387 Score = 203 bits (224), Expect = 3e-47 Identities = 380/548 (69%), Gaps = 9/548 (2%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| ||||| || || ||||||||||||| ||||| |||||| || | ||| Sbjct 32 ATGTACAAGAAGGCCGAGGCCTCCTTCTGGACGGCCGAGGAAGTCGATCTGAGCTCCGAC 91 Query 61156 ATGAATGACTGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 ||||| ||||||| || | | | | || || || ||||| || || || ||||| Sbjct 92 ATGAAGCACTGGGAATCGCTCAACAA-CGACGAGAGGCACTTCATCAAGCACGTCTTGGC 150 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 ||||| || ||| ||||| ||||| |||||| | | || ||| | |||| Sbjct 151 CTTCTTCGCGGCTAGCGACGGCATCGTGGCCGAGAATCTCGCCGGCCGCTTCATGAAGGA 210 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 |||||| ||| | |||||||| || ||||||||||| || || ||||| ||||| |||| Sbjct 211 GGTGCAGGTGCCCGAGGCGCGCTGCTTCTACGGCTTTCAAATCGCCATCGAGAACATCCA 270 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGGCGGAACGTGAAC 61393 ||| ||||||||| | || ||||| || ||| ||| ||| ||| || | | || | Sbjct 271 CTCCGAGATGTACTCGCTCCTTATCGACACCTACGTCAAGGACTCGGTCGAGAAG-GACC 329 Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453 | | ||| ||||||||||| | || |||| ||| ||| || || ||||| | | Sbjct 330 GCCTCTTCCGCGCCATCGAGACCGTGCCCTCGGTCAAGAAGAAGGCCGACTGGGCGATGA 389 Query 61454 ATTGGATC-ACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510 | |||||| || || | || | || || | || || | | | ||| || | | Sbjct 390 AGTGGATCAACAAGGAGGGCGTCGAGACCTTCGCCGAGCGTCTCGTCGGATTCGCCGCCG 449 Query 61511 TCGAGGGTGTATTTTTCAGTGG-ATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||||| | || ||| || | | | || | | ||||| ||| | ||||| ||||| Sbjct 450 TCGAGGGCATCTTCTTCTCCGGCAGCTTCTG-CTCCATCTTCTGGCTCAAGAAGCGTGGC 508 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || |||||||| || ||||||| || ||| |||| ||||| |||||| | || || Sbjct 509 CTCATGCCCGGCCTCGCCTTCAGTAACGAGATGATCAGCCGCGATGAGGGCCTCCACTGC 568 Query 61630 GATTTTGC 61637 || || || Sbjct 569 GACTTCGC 576 >seq53831 Length=10026 Score = 163 bits (180), Expect = 2e-35 Identities = 280/406 (69%), Gaps = 8/406 (2%) Strand=Plus/Plus Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 |||||||| | | ||| || ||||| | || |||||||| ||||| || | |||||| Sbjct 9521 ATGGTGCCGAGGTGCTGGTGGTTACTTTCGCTGTTGCATGCGTCCTTATAGAGCATGTAG 9580 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || ||||| ||||| ||||| ||||| | ||| ||| ||| || | | ||||| | Sbjct 9581 GGCGTGCCCGTCTCCACTTGTGACTCGAGGATCGCGAACCACAGCTCCTGGGCCTTGATG 9640 Query 66209 GTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268 || || || | |||| || ||||| | ||||||| | || || || ||| Sbjct 9641 GTGCGGCGGGCGCGGCCTTCCCGCTCGTAGCGGGCGTAGAGTTCCTCAAACTTGTCTCCC 9700 Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 || || || |||| || | || ||| | ||||| | |||| ||| Sbjct 9701 CAGACGTCCTGAAGACCCGGTGCTTCGTTGGGATCGAACAGCGCC-----ACCAGCCT-- 9753 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 | || || ||| |||||||| || | ||| |||||||||||||| ||||| || || Sbjct 9754 -CGACGCGCTTCATGAATAGATCGGGGACCCACAGGGCGTAGAAGAGGTCGCGAGCGCGG 9812 Query 66389 TGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 | |||||| ||||||| || || | | ||||||||||| |||||||| | |||||| Sbjct 9813 TTCTCCTCCTTGCCGTGGTTCTTCCTGAGATCGAGGAACTCGAAGATGTCCGAATGCCAG 9872 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494 || ||||||||||| | ||| | ||| | || || || || |||| Sbjct 9873 GGCTCCAGGTAGATCGTGAAGGCTCCCTTGCGCTTTCCTCCGCCTT 9918 Score = 145 bits (160), Expect = 6e-30 Identities = 211/298 (71%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 ||||| |||| || |||||| ||||||||||| | || || ||| |||||| Sbjct 5237 GAGAACCCTCAACGCTTCGTACTGTTCCCCATCCGCCACCAGCGCATCTGGGAGATGTAC 5296 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161 || ||||| || || ||||||||||| | |||||||||||| | | ||||| || Sbjct 5297 AAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGTCGATCTCGGTGATGACATCAAG 5356 Query 61162 GACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTT 61221 ||||| | | | || || |||| || ||||| || || || |||| |||||| Sbjct 5357 CACTGGCAATCTCTCACGGCCGACGAACCGCACTTCATCAAGCACGTTCTGGCATTCTTT 5416 Query 61222 GCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAA 61281 |||||| ||||||||||| ||||| | || || ||| | | ||||||| | Sbjct 5417 GCCGCTAGCGACGGTATCGTGGCAGAGAACCTGGCGGGTCGCTTCATGAAAGAGGTGCCA 5476 Query 61282 GTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGG 61339 ||| | || || | || |||||||||||||| || ||||| ||||| ||||||||| Sbjct 5477 GTGCCCGAAGCAAGGTGCTTCTACGGCTTCCAAATCGCCATCGAGAACATCCACTCGG 5534 Score = 91.5 bits (100), Expect = 1e-13 Identities = 167/237 (70%), Gaps = 12/237 (5%) Strand=Plus/Plus Query 65108 GCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAATGC 65167 |||||||| | || |||||||||||||||||||| | ||||| || ||||| ||| Sbjct 8745 GCCTTGGTGCGGAGGTAGTACATGCCGGTCTTGAGACTCTTGCGCCACGCTTAGAAGTGC 8804 Query 65168 ATCGATGATAATTTTGCATAATTCGGCTCGGCCACATGCATATTCAACGACTGACTCTGA 65227 || || | | || | | | || ||||||| | | || | |||||| ||||| Sbjct 8805 ATGGACGTGAGCTTGGGGAAGGTGGGGTCGGCCATGTAGAGGTTGAGCGACTGGCTCTGG 8864 Query 65228 TCGATGTAACGACCA-CGATCTGCAGCCATGTCAATGAT-ACGACGTCCCGATATCTCCC 65285 ||||||| | | | | || || || |||| ||| ||||| ||| || ||| ||||||| Sbjct 8865 TCGATGT-AGGCCGAGCGGTCGGCGGCCAGGTCGATGATGACG-CGCTGCGAGATCTCCC 8922 Query 65286 AGACGGTCTTGTACAGG----CGACGTACCTCAATTGGAATCTCCTCAATGTCCTGG 65338 | || |||||||| ||| ||||| ||| | || ||||| || |||| |||| Sbjct 8923 ACACAGTCTTGTAGAGGGCCTTGACGT--CTCGA--GGGATCTCGTCGATGTTCTGG 8975 >seq39829 Length=6283 Score = 149 bits (164), Expect = 5e-31 Identities = 276/399 (69%), Gaps = 17/399 (4%) Strand=Plus/Minus Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 ||||| ||||| ||||| || ||||| || | |||||| || ||||| ||||| ||||| Sbjct 4622 TTACTTTTGCGGTTGCAAGCGTCCTTATAGAGCATGTAGGGCGTGCCCGTCTCGACTTGT 4563 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTT 66228 ||||| | ||| ||| ||| || | | ||||| | || || | ||| | |||| Sbjct 4562 GACTCGAGGATCGCGAACCACAGCTCCTGGGCCTTGATAGTGCGG-CGGCCACGGCCTTC 4504 Query 66229 GCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGG 66288 | ||||| | |||||| ||||| || ||||| ||||| |||| || Sbjct 4503 CCTCTCGTAGCGGGTGTAGAGTCCCTCGAACTTATCTCCCCAGACTTCCTGAAGACTCGG 4444 Query 66289 ACACTTGTGTGGACACATCAGCGACCAAT---CACCATCCTGTTCTACACGACGCATAAA 66345 | || ||| | ||||||||| | ||||| ||| | || || ||| || Sbjct 4443 TGCTTCGTTGGGATCGAACAGCGACCAGTAGCCACCAGCCT---CAACGCGCTTCATGAA 4387 Query 66346 TAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTG 66405 |||||| || | ||| |||| ||||||||| ||||| || || | ||||| ||||||| Sbjct 4386 TAGATCGGGGACCCATAGGGTGTAGAAGAGGTCGCGAGCGCGGTTCTCCT---TGCCGTG 4330 Query 66406 AT---TTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGAT 66462 | ||||| | | |||||||||||||||||| |||||| || ||||||||||| Sbjct 4329 GTGCTTTTTGAGA---TTGAGGAACTCAAAGATGTCCAAATGCCAGGGCTCCAGGTAGAT 4273 Query 66463 GGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGAC 66501 | ||| | ||| | ||||| ||||| || | || ||| Sbjct 4272 CGTGAAGGCTCCCTTTCGTTTCCCGCCGCCATTGTTGAC 4234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397274904173600