Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07]
62,836 sequences; 75,821,316 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq44820 205 1e-50
seq32506 114 2e-23
>seq44820
Length=2078
Score = 205 bits (226), Expect = 1e-50
Identities = 115/116 (99%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 143 TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAA 202
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 676 TATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAA 735
Query 203 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 736 CTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 791
Score = 147 bits (162), Expect = 3e-33
Identities = 103/116 (89%), Gaps = 1/116 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 429 ACTCGTTGGATTAATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 488
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGC 116
|||||||||||||||||||||| ||||| | || || ||||||||||||||||
Sbjct 489 CCTGTTATTGCCTCAAACTTCCGCTGGCTAGGCGCGCAGCAGTCCCTCTAAGAAGC 544
>seq32506
Length=129
Score = 114 bits (126), Expect = 2e-23
Identities = 63/63 (100%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 129 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 70
Query 254 CTG 256
|||
Sbjct 69 CTG 67
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796314968916
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |