Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07] 62,836 sequences; 75,821,316 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq20842 96.9 7e-18 >seq20842 Length=127 Score = 96.9 bits (106), Expect = 7e-18 Identities = 94/117 (80%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 42 CTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTC-T 100 || ||||| |||||||||||||||| ||||||| ||||||||||| | || || | | Sbjct 115 CTCGATCAAGCTTTCGCCCATTGTCAAATATTCTCCACTGCTGCC-CTTTTAAAAGACTT 57 Query 101 GGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGT 157 || |||| | ||||| ||| |||| |||||||| |||||| ||||| || | ||||| Sbjct 56 GGGCCGT-TTTCAGTCCCAATGTGGCTGATCATTCTCTCAAACCAGCTAAGCATCGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071326398080