Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07] 62,836 sequences; 75,821,316 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq28760 75.2 4e-11 >seq28760 Length=108 Score = 75.2 bits (82), Expect = 4e-11 Identities = 76/99 (77%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 152 ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTC 211 |||||| ||| || ||||| ||| ||| |||||| |||||||||||||| | || | || Sbjct 107 ATTTCGTAGAGTACTAGCTAACACTAAGCTTGATTAGCCTTTCACCCCTAGCTACCGCTC 48 Query 212 ATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCA 250 ||||| | | | |||| || |||||||| |||| || Sbjct 47 ATCCCGGTATTATGCAACATACATGGGTTCGATCCTTCA 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816457892864