Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07] 62,836 sequences; 75,821,316 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq44820 84.2 3e-14 seq39968 84.2 3e-14 >seq44820 Length=2078 Score = 84.2 bits (92), Expect = 3e-14 Identities = 92/121 (76%), Gaps = 15/121 (12%) Strand=Plus/Plus Query 10 AAACCAAC--AAAATAGGGACGCACG-TCCTATTCTATTATTCCATGCTAATGTATTCGG 66 |||||||| |||||||| || | |||||||| ||||| |||||||||||||||||| Sbjct 1276 AAACCAACTGAAAATAGGAGGACAGGGTCCTATTCCATTATCCCATGCTAATGTATTCGG 1335 Query 67 --GCGTAA----------GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTG 114 || || |||||||||||||||||||||||| ||| |||||| | ||| Sbjct 1336 TGGCAGAAAATTGAATCTGCCTGCTTTGAACACTCTAATTTTTTCACGGTAAACGATCTG 1395 Query 115 G 115 | Sbjct 1396 G 1396 >seq39968 Length=1275 Score = 84.2 bits (92), Expect = 3e-14 Identities = 92/121 (76%), Gaps = 15/121 (12%) Strand=Plus/Plus Query 10 AAACCAAC--AAAATAGGGACGCACG-TCCTATTCTATTATTCCATGCTAATGTATTCGG 66 |||||||| |||||||| || | |||||||| ||||| |||||||||||||||||| Sbjct 151 AAACCAACTGAAAATAGGAGGACAGGGTCCTATTCCATTATCCCATGCTAATGTATTCGG 210 Query 67 --GCGTAA----------GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTG 114 || || |||||||||||||||||||||||| ||| |||||| | ||| Sbjct 211 TGGCAGAAAATTGAATCTGCCTGCTTTGAACACTCTAATTTTTTCACGGTAAACGATCTG 270 Query 115 G 115 | Sbjct 271 G 271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594837687624