Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07] 62,836 sequences; 75,821,316 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq59502 78.8 2e-12 seq49441 78.8 2e-12 >seq59502 Length=5538 Score = 78.8 bits (86), Expect = 2e-12 Identities = 66/81 (81%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 661 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 602 Query 218 GTACGTTCTTTCTGAGAGCCT 238 ||||| ||||| || |||| Sbjct 601 TTACGTCCTTTCGCAGCGCCT 581 >seq49441 Length=492 Score = 78.8 bits (86), Expect = 2e-12 Identities = 66/81 (81%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 158 CCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCA 217 |||| |||||||| |||||||| ||||| ||| | | ||| ||||||||||| |||||| Sbjct 157 CCTTCTGCTTCTCGAGCAGCTTTCGCTTCCGGGTGATGTCGCCGCCGTAGCACTTGGCCG 98 Query 218 GTACGTTCTTTCTGAGAGCCT 238 ||||| ||||| || |||| Sbjct 97 TTACGTCCTTTCGCAGCGCCT 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 837873182976