Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20rhysodes_20[genbank_20GCA_5F000826385.1_202015-01-07] 62,836 sequences; 75,821,316 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq26640 150 6e-34 seq27842 82.4 3e-13 seq27289 80.6 9e-13 seq38639 78.8 3e-12 seq35222 78.8 3e-12 >seq26640 Length=163 Score = 150 bits (166), Expect = 6e-34 Identities = 107/123 (87%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCG 409 |||||||| ||||| | | ||||||| |||| ||||||||| |||||| ||||||||| Sbjct 129 AATTTCACTGGGCCAACGCTGGAGACAGTAGGGAAGTCGTTACACCATTCATGCAGGTCG 70 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct 69 GAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTA 10 Query 470 CTG 472 ||| Sbjct 9 CTG 7 >seq27842 Length=82 Score = 82.4 bits (90), Expect = 3e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTG 472 |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct 19 TACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTACTG 76 >seq27289 Length=79 Score = 80.6 bits (88), Expect = 9e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 416 ACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTG 472 ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct 79 ACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTACTG 23 >seq38639 Length=92 Score = 78.8 bits (86), Expect = 3e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTG 472 |||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||| Sbjct 13 TACCCGACAAGGAATTGCGCTACCTTAGGACCGTTATGGTTACAGCCGCCGTTTACTG 70 >seq35222 Length=127 Score = 78.8 bits (86), Expect = 3e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTG 472 |||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| Sbjct 109 TACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATGGTTACAGTCGCCGTTTACTG 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701330279936