Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq22775 194 3e-47 >seq22775 Length=2291 Score = 194 bits (214), Expect = 3e-47 Identities = 130/141 (92%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| | Sbjct 296 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 353 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTT-CAAAGATT 119 ||||||||||| ||| |||| |||||||||||||||| |||||| |||||| |||||||| Sbjct 354 CTCGTTGAAGATCAATAATTACAATGATCTATCCCCAGCACGATTAAATTTGCAAAGATT 413 Query 120 ACCCGGACCTGTCGGCCAAGG 140 |||||||||| |||||| ||| Sbjct 414 ACCCGGACCTATCGGCCCAGG 434 Score = 143 bits (158), Expect = 4e-32 Identities = 86/89 (97%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 146 GACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 205 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 502 GACTCGTTGAATTAATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 561 Query 206 ACCTGTTATTGCCTCAAACTTCCG-TGGC 233 |||||||||||||||||||||||| |||| Sbjct 562 ACCTGTTATTGCCTCAAACTTCCGCTGGC 590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751824446070