Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq12962 102 9e-20 seq8620 102 9e-20 seq1880 96.9 4e-18 seq17130 93.3 5e-17 seq16671 93.3 5e-17 seq15712 93.3 5e-17 seq15180 93.3 5e-17 seq14656 93.3 5e-17 seq13566 93.3 5e-17 seq11682 93.3 5e-17 seq10788 93.3 5e-17 seq9096 93.3 5e-17 seq8270 93.3 5e-17 seq7612 93.3 5e-17 seq7376 93.3 5e-17 seq6839 93.3 5e-17 seq5093 93.3 5e-17 seq1094 93.3 5e-17 seq5890 87.8 2e-15 seq1580 87.8 2e-15 seq15588 86.0 7e-15 seq9991 86.0 7e-15 seq5128 86.0 7e-15 seq1965 86.0 7e-15 seq14082 84.2 2e-14 seq9469 84.2 2e-14 seq3562 84.2 2e-14 seq7215 82.4 8e-14 seq561 82.4 8e-14 seq10935 80.6 3e-13 seq15918 75.2 1e-11 seq5430 75.2 1e-11 seq2661 75.2 1e-11 >seq12962 Length=127 Score = 102 bits (112), Expect = 9e-20 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 89 TATACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 30 Query 173 A 173 | Sbjct 29 A 29 >seq8620 Length=90 Score = 102 bits (112), Expect = 9e-20 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 17 TATACCATTCGTGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 76 Query 173 A 173 | Sbjct 77 A 77 >seq1880 Length=75 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 68 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 9 Query 173 A 173 | Sbjct 8 A 8 >seq17130 Length=64 Score = 93.3 bits (102), Expect = 5e-17 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 118 CATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 CATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 56 >seq16671 Length=76 Score = 93.3 bits (102), Expect = 5e-17 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 118 CATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 14 CATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 69 >seq15712 Length=127 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 22 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTTGCTACCTTAGGACCGTT 81 Query 173 A 173 | Sbjct 82 A 82 >seq15180 Length=82 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 11 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGAACCGTT 70 Query 173 A 173 | Sbjct 71 A 71 >seq14656 Length=127 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 77 TATACCATTCATGTAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 18 Query 173 A 173 | Sbjct 17 A 17 >seq13566 Length=127 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 100 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGAAATTTCGCTACCTTAGGACCGTT 41 Query 173 A 173 | Sbjct 40 A 40 >seq11682 Length=127 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 20 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGATACCTTAGGACCGTT 79 Query 173 A 173 | Sbjct 80 A 80 >seq10788 Length=127 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 34 TATACCATTCATGCAGGTCGGAACTCACCCAACAAGGAATTTCGCTACCTTAGGACCGTT 93 Query 173 A 173 | Sbjct 94 A 94 >seq9096 Length=92 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 9 TATACCATTCATGCAGGTCGTAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 68 Query 173 A 173 | Sbjct 69 A 69 >seq8270 Length=127 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || |||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 55 TATACCATTTATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 114 Query 173 A 173 | Sbjct 115 A 115 >seq7612 Length=127 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 93 TATACCATTCATGCAGGTCGGAACTCACCTGACAAGGAATTTCGCTACCTTAGGACCGTT 34 Query 173 A 173 | Sbjct 33 A 33 >seq7376 Length=127 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 90 TATACCATTCATGCAGGTCGGAACTCCCCCGACAAGGAATTTCGCTACCTTAGGACCGTT 31 Query 173 A 173 | Sbjct 30 A 30 >seq6839 Length=68 Score = 93.3 bits (102), Expect = 5e-17 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 118 CATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 68 CATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 13 >seq5093 Length=127 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 84 TATACCATTCATGCAGGTCGAAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 25 Query 173 A 173 | Sbjct 24 A 24 >seq1094 Length=127 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 || ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 8 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACTGTT 67 Query 173 A 173 | Sbjct 68 A 68 >seq5890 Length=127 Score = 87.8 bits (96), Expect = 2e-15 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 168 || ||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 56 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGAC 1 >seq1580 Length=66 Score = 87.8 bits (96), Expect = 2e-15 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 168 || ||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 56 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGAC 1 >seq15588 Length=127 Score = 86.0 bits (94), Expect = 7e-15 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 124 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 127 TGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 78 >seq9991 Length=82 Score = 86.0 bits (94), Expect = 7e-15 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 124 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 81 TGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 32 >seq5128 Length=64 Score = 86.0 bits (94), Expect = 7e-15 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 124 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2 TGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 51 >seq1965 Length=64 Score = 86.0 bits (94), Expect = 7e-15 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 124 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 TGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 50 >seq14082 Length=109 Score = 84.2 bits (92), Expect = 2e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 125 GCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 GCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 49 >seq9469 Length=64 Score = 84.2 bits (92), Expect = 2e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 125 GCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 63 GCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 15 >seq3562 Length=64 Score = 84.2 bits (92), Expect = 2e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 125 GCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 64 GCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 16 >seq7215 Length=64 Score = 82.4 bits (90), Expect = 8e-14 Identities = 50/53 (94%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 || ||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 53 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAG 1 >seq561 Length=67 Score = 82.4 bits (90), Expect = 8e-14 Identities = 50/53 (94%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 || ||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 53 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAG 1 >seq10935 Length=68 Score = 80.6 bits (88), Expect = 3e-13 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 127 AGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1 AGGTCGGAACTCACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 47 >seq15918 Length=66 Score = 75.2 bits (82), Expect = 1e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161 || ||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 49 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACC 1 >seq5430 Length=65 Score = 75.2 bits (82), Expect = 1e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161 || ||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 17 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACC 65 >seq2661 Length=64 Score = 75.2 bits (82), Expect = 1e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161 || ||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 50 TATACCATTCATGCAGGTCGGAACTCACCCGACAAGGAATTTCGCTACC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547072256502