Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq22775 86.0 7e-15 >seq22775 Length=2291 Score = 86.0 bits (94), Expect = 7e-15 Identities = 94/122 (77%), Gaps = 16/122 (13%) Strand=Plus/Plus Query 10 AAACCAACA----AAATAGGGACGCACG-TCCTATTCTATTATTCCATGCTAATGTATTC 64 ||||||||| ||||||| || | |||||||| ||||| |||||||||||||||| Sbjct 1408 AAACCAACACGCAAAATAGGAGGACAGGGTCCTATTCCATTATCCCATGCTAATGTATTC 1467 Query 65 GG--GC-----GTAAGCCTGC----TTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCT 113 || || | |||||||| |||||||||||||||||| ||| |||||||| || Sbjct 1468 GGTGGCAGATTGAAAGCCTGCCCGCTTTGAACACTCTAATTTTTTCACGGTAAAAGATCT 1527 Query 114 GG 115 || Sbjct 1528 GG 1529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595061050932