Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1922 98.7 3e-18 >seq1922 Length=241 Score = 98.7 bits (108), Expect = 3e-18 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||| ||| || | ||||| | ||| ||| |||||||| |||||| | ||| Sbjct 220 GCCAGATTGATAGTACTTTAACAAGTGCTGAAGGATCGAACCCATGTATGTTGCATAATA 161 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 ||||||||| || | ||||||||||||||||| ||| ||| | ||||| || |||| Sbjct 160 CCGGGATGAGCAGTAGCTAGGGGTGAAAGGCTAATCAAGCTTAGTGTTAGCTAGTACTCT 101 Query 182 CCGAAAACTATTTAGGTAGTGC 203 ||||| |||||||||||| || Sbjct 100 ACGAAATCTATTTAGGTAGAGC 79 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689192840192