Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq22879 104 4e-20 >seq22879 Length=6356 Score = 104 bits (114), Expect = 4e-20 Identities = 97/121 (80%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | || |||||| |||||||| ||| | || | || | |||| Sbjct 5448 GTACGAGAGGAACAGTCGA-TTCAGA-TAATTGGTATTTTCCCTTGGCCGAAAGGCCAGT 5505 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||||||||| |||||||||||||||||||||||| |||||||| ||| | Sbjct 5506 GGGGAGAAGCTACCATCTGTGGGATTATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 5565 Query 121 G 121 | Sbjct 5566 G 5566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819008758272