Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthamoeba_20royreba_20[genbank_20GCA_5F000826365.1_202015-01-07] 24,098 sequences; 79,544,075 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq23003 379 2e-100 seq19361 318 5e-82 seq23741 131 1e-25 >seq23003 Length=12893 Score = 379 bits (420), Expect = 2e-100 Identities = 1229/1881 (65%), Gaps = 58/1881 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||||| ||| || | || || | || | || ||||||||||| || Sbjct 2413 ATCGACAGTGAACTTGATGGCGGTGGCGGCAGGACGCGTACGGAGGTAGTACATGCCAGT 2354 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 ||||||||| |||||||| ||||| |||||||| | | || || | ||||| Sbjct 2353 CTTGAGGCCCTTGCGCCAAGCGTAGAAGTGCATCGAAGTGAGCTTGGCGAAGGAAGGCTC 2294 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 | ||| | || || | ||||| |||||||||||||| | ||||| |||||||| Sbjct 2293 GCCCATGTAGATGTTGAGGGACTGGCTCTGATCGATGTACGCAGAGCGATCGGCAGCCAT 2234 Query 65257 GTCAATGA-TACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 ||| |||| |||| | | || |||||||| || ||||||||||| | | | | ||| Sbjct 2233 GTCGATGACTACGCGCTGCGGA-ATCTCCCACACAGTCTTGTACAG-CTTCTTGAGATCA 2176 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 || ||||| || |||| ||| ||||| || | ||| | | | | || | | Sbjct 2175 TCGGGGATCTCGTCGATGTTCTGCACTGAGCC--GTTGTG-AGCGACGAGTTTGTTCTTG 2119 Query 65375 ---GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 | | |||||||| || || || || | | | | ||| |||| ||| Sbjct 2118 AGGGCGGCCGACCACAAGCCTCGCTCCATCAGGTCGCGGAGGAGGTGCTCGTTGACGACG 2059 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||| ||||||| || | ||||| ||||| ||||| ||| || || ||| | Sbjct 2058 GTGAAGTCGCCGGCAAGAATGCGACGTGTGTAGATATTGGAGGTGTACGGCTCGAAGCAC 1999 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| || | || ||||| || |||||||| || || | | ||| Sbjct 1998 TCGTTGTTGCCAAGAATCTGTGAGGTGGATGCCGTAGGCATGGGCGCCACGAGGAGGGAG 1939 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || | | |||| | | |||||| ||| | |||||| |||| | Sbjct 1938 TTCCTGAGACCGTGCTGAGCGATGTTGGCACGGAGGGTAGCCCAGTCCCACCTG------ 1885 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671 || | | || ||| | ||| |||| || | || ||||| || || Sbjct 1884 TCCGAGGGAGTAACACCCCAGAGATCGGGTTGGAGCTTGCCCTCGGAAGCCGGCGAGCC- 1826 Query 65672 AGGAAAC-TATCGTACACTCCCTCCTCCTTGGCAA----GTTGACAGCTGGTCTCGAGTG 65726 || | || || ||| |||| ||||| ||| | |||| ||| | ||||| Sbjct 1825 AGCATACGTAGGGTAGGTGCCCTGCTCCTGGGCCATCTCGTTGGAAGCAGT----GAGTG 1770 Query 65727 CGGCAAAATAAATGGTCTCGAAAAT-GCGTCGATTAAGTTCACGTGCCTCATCGCTCTCG 65785 |||| | || ||||||||||| || ||| ||||| || || || ||||| | |||||| Sbjct 1769 CGGCGTAGTAGATGGTCTCGAAGATAGCG-CGATTGAGCTCGCGGGCCTCCTGGCTCTCC 1711 Query 65786 TACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845 | || | ||| || | ||| |||||| ||||| ||||| |||| |||||| ||| Sbjct 1710 CAGGGGCAGCGCATGAGCATAAAGACGTCGGCAAGACCCTGAACACCAAGACCGATCGGA 1651 Query 65846 CGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATG 65905 || || |||| || || | |||||||| || |||||||| ||||| ||||| | Sbjct 1650 CGGTGGCGCATGTTCGAGTTGCGGGCCTCAGGGACTGGGTAGTAGTTGATGTCGATCACC 1591 Query 65906 CGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGT 65965 || | ||||| || || || | || | ||||| | ||| ||| Sbjct 1590 TTGTTGAGGTTGCGGGTGACTACTTTGACCA--CGTCGTAGAGCTTCT---------TGT 1542 Query 65966 TTAGGACGATCGGGAGTG-CCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTT 66024 ||||| | || ||| || || |||||||||| || || || |||||||| Sbjct 1541 -------GATCGA-ACTGTCCGTTGACGACGTACTTGGGAAGAGCGAGCGACGCGAGGTT 1490 Query 66025 GCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCA 66084 ||| ||||| | ||| ||||||| || |||| | | || ||||||| || | | Sbjct 1489 GCACACAGCGACCTCATCAGGAGACGTGTACTGAATGACCTCCGTGCACAAGTTCGAGGA 1430 Query 66085 GCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCAT 66144 | |||||||| | | ||| || || |||| |||||| | |||||| || | || Sbjct 1429 CTGGATGGTGCCAAGGTGCTGCTGGTTCGACTTGGCATTGCACGAATCCTTATAGAGGAT 1370 Query 66145 GTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTT 66204 ||| || ||||||||||| | || ||||| | |||| | ||| || | | ||||| Sbjct 1369 GTAAGGCGTGCCGGTCTCGATCTGCGACTCGAGAATGGAGAACCACAGCTCCTGGGCCTT 1310 Query 66205 CACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264 || ||| || | |||| | |||||| | |||| | ||||| || Sbjct 1309 GACGACACGGCGAGCGCGGCCTTCGTTCTCGTAACGCACGTACTTCTCCTCGAACTCGTC 1250 Query 66265 ACCCCATACTTCGGACAGACATGGACACTT-GTGTGGACACATCAGCGACCAATCACCAT 66323 ||||| ||| | || | ||| | ||| || || || | |||||||| || || | Sbjct 1249 GCCCCAGCACTCGAAGAGGCCTGG-CGCTTCGTTGGGGCAGAAGAGCGACCAGTCGCC-T 1192 Query 66324 CCTGT-TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGT 66382 || | || || || ||| || || || || | ||| ||| | ||||||||||| || Sbjct 1191 CCGGCCTCGACGCGCTTCATGAACAGGTCGGGCACCCACAGGCCATAGAAGAGATCACGA 1132 Query 66383 GCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 || || | |||||| |||| || || || | || ||||| || ||||||||||| Sbjct 1131 GCACGGTTCTCCTCCTTGCCATGGTTCTTCTTGAGCTCAAGGAAATCGAAGATGTCGGCG 1072 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACG 66502 ||||| || ||||| ||||| ||||||| ||| | || ||||| || || || || ||| Sbjct 1071 TGCCACGGCTCCAGATAGATCGCGAACGCTCCCTTGCGCTTGCCACCGCCCTGATCAACG 1012 Query 66503 TAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTG 66562 ||||||||| || |||| | ||||| | ||| || | ||| ||||| ||| | || ||| Sbjct 1011 TAGCGAGCGGTATCGTTGTAAACACGGAGCATGGGGATGAGTCCGTTGGATGTTCCGTTG 952 Query 66563 GTGCCGTCGATGGGGGATCCTCG-TGCCCGTATATCGTGAACATTCAGACCAATACCACC 66621 |||||| |||| ||| ||| || || || ||| || | |||||| ||||| Sbjct 951 GTGCCGCGGATGTAGGA-GTTCGAAGCGCGGATGCGGTGGACGGCAACACCAATGCCACC 893 Query 66622 GGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTC 66681 || | ||| |||||| ||| || | | || | | ||||| || |||||||| Sbjct 892 TGCGGACTTGGAGATGAGAGCGCACTGCTTGAGCGTGTCGTAGATGCCCTCGATGGAGTC 833 Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741 |||| || || || ||| |||| || || || || || ||| | || ||| Sbjct 832 CTCCTTCATCGTGAGCAGGAAGCACGACGAGAGCTGCGGACGAGGCGTGCCCGCGTTGAA 773 Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801 ||| || || || |||||||| ||| || |||| | | | || ||||| | || Sbjct 772 GAGAGTAGGAGTGGCGTGCGTGAAGAGCTGCTGAGAAAGGAGGTCATAGGTCTCCAGCAC 713 Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCG 66861 || ||||| || |||| || | || | ||| || | || || ||||| Sbjct 712 GGCGGGGATGTTGTCCTTGTGAAGGCCCACGGCGACCCTCATGAGCATGTGCTGCGGCCG 653 Query 66862 TTCGACCA-GCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 || || | | | ||| | ||| | | | ||| |||||||| |||||||||| |||| Sbjct 652 CTCCACGATGAC--TCCGTCGATCTTGAAGAGGTACGAGCGTTCGAGGGTCTTGAAACCA 595 Query 66920 AAGTACGAGTAATTGAAATCG 66940 ||||||||||| | ||| ||| Sbjct 594 AAGTACGAGTAGTGGAAGTCG 574 >seq19361 Length=29087 Score = 318 bits (352), Expect = 5e-82 Identities = 1213/1880 (65%), Gaps = 58/1880 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||| ||| || ||||| | || | ||| ||||||||||||||| Sbjct 13261 TCGACGGTGAACTTGATGGCGGCGGCAGCAGGACGCGTACGAAGGTAGTACATGCCGGTC 13320 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 |||||||| |||||||| ||||| |||||||| | | || || | ||||| Sbjct 13321 TTGAGGCCCTTGCGCCAAGCGTAGAAGTGCATCGAAGTGAGCTTGGCGAAGGAAGGCTCT 13380 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 ||| | || || | |||||| ||||| |||||||| | || || || |||||| Sbjct 13381 CCCATGTAGATGTTGAGCGACTGGCTCTGGTCGATGTATGCAGAGCGGTCGGCGGCCATG 13440 Query 65258 TCAATGATACGACGTCC--CGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 || |||| ||||| | || |||||||| || ||||||||||| | | | | ||| Sbjct 13441 TCGATGA--CGACGCGCTGCGGAATCTCCCACACAGTCTTGTACAG-CTTCTTGAGGTCA 13497 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAA---TGCGATTACGC 65371 || ||||| || |||| ||| || || || | || | | || ||| | Sbjct 13498 TCAGGGATCTCGTCGATGTTCTGCACGGAGCCGTTGTGGGCCACGAGTTTGTTCTTAAGG 13557 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 | | |||||||| || || || || | | | | ||| |||| ||| Sbjct 13558 GCGGCC---GACCACAAGCCTCGCTCCATCAGGTCGCGGAGGAGGTGCTCGTTGACGACG 13614 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||| ||||| | || | ||||| ||||||||||| ||| || || ||| | Sbjct 13615 GTGAAGTCGCCCGCAAGAATGCGACGTGTGTAGATGTTGGAGGTGTACGGCTCGAAGCAC 13674 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 || ||||||| ||||| || | || ||||| || |||||||| || || | | ||| Sbjct 13675 TCGTTGTTGCCGAGAATCTGAGAGGTGGATGCTGTAGGCATGGGTGCCACGAGGAGGGAG 13734 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || | | |||| | | |||||| ||| | |||||| |||| | || Sbjct 13735 TTCCTGAGGCCGTGCTGAGCGATGTTGGCACGGAGGGTAGCCCAGTCCCACCT--GTCCG 13792 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTGGCCGGTGA 65667 | | || | | || | || | || || | || || ||||| || Sbjct 13793 AGGGGGTAATGCCC----CAGAGGTCGGGCTGGAGCTTGCCCTCGGAAGCTGGC----GA 13844 Query 65668 ACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGAC-AGCTGGTCTCGAGTG 65726 || | | || ||| |||| ||||||||| | | | || | | ||||| Sbjct 13845 GCCCGCGTATGTAGGGTAAGTACCCTGCTCCTTGGCCATCTCATTAGAAGCAGT-GAGTG 13903 Query 65727 CGGCAAAATAAATGGTCTCGAAAAT-GCGTCGATTAAGTTCACGTGCCTCATCGCTCTCG 65785 | || | || ||||||||||| || ||| ||||| || || || ||||| | |||||| Sbjct 13904 CAGCGTAGTAGATGGTCTCGAAGATAGCG-CGATTGAGCTCGCGGGCCTCCTGGCTCTCC 13962 Query 65786 TACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGA 65845 | || | ||| || | || |||||| ||||| ||||| |||| |||||| || Sbjct 13963 CATGGGCAGCGCATGAGCATGAAGACGTCGGCAAGACCCTGAACACCAAGACCGATCGGG 14022 Query 65846 CGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATG 65905 || ||||||| || || | |||||| || || ||||| ||||| ||||| | Sbjct 14023 CGGTGACGCATGTTCGAGTTGCGGGCCTCAATGACTGGATAGTAGTTGATGTCGATCACC 14082 Query 65906 CGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGT 65965 || | ||||| || || || | || | ||||| || ||| ||| Sbjct 14083 TTGTTGAGGTTGCGCGTGACGACCTTGACCA--CGTCGAAAAGCTTCT---------TGT 14131 Query 65966 TTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTG 66025 ||||| |||| || || |||| ||||| || || || ||||||||| Sbjct 14132 -------GATCGAACTGGCCGTTGACGACGTACTTCGGAAGAGCGAGCGACGCGAGGTTG 14184 Query 66026 CAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAG 66085 || || || | ||| ||||||| || ||| | | || ||||||| || | | Sbjct 14185 CACACTGCGACCTCATCAGGAGACGTGAACTGAATGACCTCCGTGCACAAGTTCGAGGAC 14244 Query 66086 CGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATG 66145 | |||||||| | | ||| || || |||| |||||| | |||||||| | ||| Sbjct 14245 TGGATGGTGCCGAGGTGCTGCTGGTTCGACTTGGCATTGCACGAGTCCTTGTAAAGGATG 14304 Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205 || || ||||||||||| | || || || | |||| | ||| || | | ||||| Sbjct 14305 TAAGGCGTGCCGGTCTCGATCTGTGATTCGAGAATGGAGAACCACAGCTCCTGGGCCTTG 14364 Query 66206 ACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCA 66265 || || || | || | ||||| | |||| | |||||| ||| Sbjct 14365 ACGACGCGGCGAGCGCGTCCCTCATTCTCGTAGCGCACGTACTTCTCTTCGAACTCCTCA 14424 Query 66266 CCCCATACTTCGGACAGACATGGACACTT-GTGTGGACACATCAGCGACCAATCACCATC 66324 ||||| ||| | || | || | ||| || ||||| | ||||||||||| || || Sbjct 14425 CCCCAGCACTCGAAGAGGCCGGG-CGCTTCGTTGGGACAGAAGAGCGACCAATCGCC-TC 14482 Query 66325 CTG-TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 | | || || || ||| || || || || | ||| ||| ||||||||||||| || | Sbjct 14483 CGGCCTCAACGCGCTTCATGAACAGGTCCGGCACCCACAGGCCGTAGAAGAGATCACGAG 14542 Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443 | || | |||||| |||| || || || | || ||||| || ||||| ||||| | Sbjct 14543 CGCGGTTCTCCTCCTTGCCATGGTTCTTCTTGAGCTCAAGGAAATCGAAGATATCGGCGT 14602 Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503 |||| || ||||| ||||| ||||||| ||| |||| ||||| || || || || |||| Sbjct 14603 GCCACGGCTCCAGATAGATCGCGAACGCTCCCTTACGCTTGCCACCGCCCTGATCAACGT 14662 Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 |||||||| || |||| ||||||| | ||| || | ||| || || || | || |||| Sbjct 14663 AGCGAGCGGTATCGTTGTAGACACGAAGCATGGGGATGAGTCCATTCGACGTTCCGTTGG 14722 Query 66564 TGCCGTCGATGGGGGATCCTCG-TGCCCGTATATCGTGAACATTCAGACCAATACCACCG 66622 ||||| |||| || ||| || || || |||||| | ||||| |||||| Sbjct 14723 TGCCGCGGATGTACGA-GTTCGAAGCGCGGATGCGGTGAACGGCAACTCCAATGCCACCG 14781 Query 66623 GCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCA 66682 || | ||| |||||| ||| || | | || | | ||||| || |||||||| Sbjct 14782 GCAGACTTGGAGATGAGAGCGCACTGCTTGAGCGTGTCGTAGATGCCCTCGATGGAGTCC 14841 Query 66683 CCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAG 66742 |||| || || || ||| |||| || || || || || ||| | || |||| Sbjct 14842 TCCTTCATCGTGAGCAGGAAGCACGACGACAGCTGCGGACGAGGCGTGCCCGCGTTGAAG 14901 Query 66743 AGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACA 66802 || || || || |||||||| ||| || | || | | || ||| ||||| | || Sbjct 14902 AGAGTAGGAGTGGCGTGCGTGAAGAGCTGCTGCGAGAGGAGATCGTATGTCTCCAGCACG 14961 Query 66803 GCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGT 66862 || ||||| || |||| |||| || | ||| || | || || ||||| Sbjct 14962 GCGGGGATGTTGTCCGTGTGAAGGCCGACGGCGACCCTCATGAGCATGTGCTGCGGCCGC 15021 Query 66863 TCGACCA-GCCGATCC-TTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAA 66920 || || | | | ||| | || | | | ||| |||||||| |||||||||| ||||| Sbjct 15022 TCCACGATGAC--TCCGTCAATCTTGAAGAGGTACGAGCGTTCGAGGGTCTTGAAACCAA 15079 Query 66921 AGTACGAGTAATTGAAATCG 66940 |||||||||| ||||| ||| Sbjct 15080 AGTACGAGTAGTTGAAGTCG 15099 >seq23741 Length=113318 Score = 131 bits (144), Expect = 1e-25 Identities = 410/628 (65%), Gaps = 14/628 (2%) Strand=Plus/Plus Query 61308 CTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTA 61367 ||| ||||| ||||| ||||| | |||||||| |||||| | || ||||| ||||| Sbjct 77989 CTTGCAGATCGCCATTGAGAACATTCACTCGGAAATGTACTCGCTCCTGATCGACACGTA 78048 Query 61368 CATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGT 61427 | | | ||| || ||| || || ||||| ||||||||||||| | | |||| Sbjct 78049 CGTAAAGGACGCGGTGGAGAAGGATCGCCTGTTCCGTGCCATCGAGACGGTGGCCTCGGT 78108 Query 61428 GAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC-AGTACAACG--GCTACATTTGG 61484 ||| ||| ||||| |||||| | || ||||| || || || || | || |||| Sbjct 78109 CAAGAAGAAGGCGGAGTGGGCCCTGAAGTGGATTGCCAAGGACGGCGTCGAGACCTTTGC 78168 Query 61485 TGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGC 61544 || || || | | || || | |||||||| | || ||| ||| || || ||| Sbjct 78169 GGAGCGTCTGGTCGGCTTCGCCGCTGTCGAGGGCATCTTCTTCTCTGGCTCCTTCTGCGC 78228 Query 61545 AATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGAT 61604 ||||| ||| | ||||| || || || ||||| ||||| ||||| || ||| | || Sbjct 78229 CATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTTGCCTTCTCGAACGAGCTCAT 78288 Query 61605 ATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGT 61664 ||||| ||||| | || || || ||||| || || || | || || || Sbjct 78289 CAGCCGCGATGAGGGTCTTCACTGCGACTTTGC---TTGCCTCCTCTACAGCATGCTCGT 78345 Query 61665 GAATCGTCCGTCGGAGGAGCGTGTGGGTG-AGATTGTTCGTGAGGCGGTAACTATCGAAC 61723 || ||| | ||| |||| | |||| | | ||||| || || || Sbjct 78346 CAACAAGCCGACCTCGGA-CGTGCCCAAGCAGATCATCCTGGAGGCCGTCGAGATTGAGA 78404 Query 61724 AGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGT 61783 |||| || | ||||| | | |||||| | |||||||||||||| || |||| Sbjct 78405 AGGAGTTCGTCACTGAGTCGCTCCCCGTCGCGCTCATCGGCATGAACGCCAACCTCATGT 78464 Query 61784 CGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGG---GTATGAAGCGGA 61840 ||||| || || ||||| ||||| |||||| | |||| | | | | ||||| Sbjct 78465 GCCAGTACATCGAGTTTGTCGCCGATCGTCTGCTCGTCGCTCTCGGCTGCGAGAAGCACT 78524 Query 61841 TCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGA 61900 || | | ||| ||||| || | ||||| | || ||||| || |||||||| | Sbjct 78525 TCAACAGTAC---CAACCCGTTCCCCTGGATGGAGCTCATCTCGCTTGAGGGCAAGACCA 78581 Query 61901 ATTTTTTCGAGAAACGTGTAGGCGACTA 61928 | || |||||| || || ||||| || Sbjct 78582 ACTTCTTCGAGCGCCGGGTGGGCGAGTA 78609 Score = 95.1 bits (104), Expect = 1e-14 Identities = 187/274 (68%), Gaps = 2/274 (1%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 ||||| || | || ||||| ||||||||||| |||| || | ||| |||||| Sbjct 77634 GAGAACCCGCACCGGTTCGTCCTGTTCCCCATCAAGTACCAGCGCGTGTGGGAGATGTAC 77693 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161 || ||||| || || ||||||||||| | ||||| |||||| | | |||||||| Sbjct 77694 AAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAAGTCGATCTAGGCCCCGACATGAAC 77753 Query 61162 GACTGGG-AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTT 61220 |||||| | | | ||| || || | || ||||| || || || | || ||||| Sbjct 77754 CACTGGGTCTCCCTCACCGA-CGACGAGCGCCACTTCATCAAGCACGTCCTCGCCTTCTT 77812 Query 61221 TGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCA 61280 ||||| ||||||||||| |||||| | | || ||| | |||| || || Sbjct 77813 CGCCGCCAGCGACGGTATCGTGGCTGAGAACCTGGCCGGGCGCTTCATGAAGGAAGTCCA 77872 Query 61281 AGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAG 61314 | | || || ||||| |||||||| |||||| Sbjct 77873 GATCCCCGAAGCTCGTTGCTTCTACGGTTTCCAG 77906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397451236514720