Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq160 156 3e-36 seq242 141 6e-32 seq291 109 4e-22 seq1738 105 5e-21 seq3209 98.7 7e-19 seq552 91.5 1e-16 >seq160 Length=64135 Score = 156 bits (172), Expect = 3e-36 Identities = 107/121 (88%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| |||||||||||||||||| |||| |||| ||||||||||| Sbjct 1894 TACGGCTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGCAAGCGCCCTCC 1835 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 ||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| Sbjct 1834 CGAAGGTTAAGCTACCTGCTTCTGGTGCAACAAACTCCCATGGTGTGACGGGCGGTGTGT 1775 Query 138 A 138 | Sbjct 1774 A 1774 >seq242 Length=118535 Score = 141 bits (156), Expect = 6e-32 Identities = 104/121 (86%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| ||||||||||||||||||||||| | ||||||| ||||| || Sbjct 116494 TACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCCTACCGTGGTAATCGCCCCCC 116553 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 | ||||| |||| |||||||| | |||||||||||||||||||||||||||||||| Sbjct 116554 TTACGGTTAGGCTAACTACTTCTGGTAAAACCCACTCCCATGGTGTGACGGGCGGTGTGT 116613 Query 138 A 138 | Sbjct 116614 A 116614 >seq291 Length=3003 Score = 109 bits (120), Expect = 4e-22 Identities = 74/83 (89%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||||||||||| ||||||| || || Sbjct 83 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCC 24 Query 75 TCCCGAAGGTTAAGCTACCTACT 97 |||||||||||| ||| ||||| Sbjct 23 TCCCGAAGGTTAGACTAGCTACT 1 >seq1738 Length=468 Score = 105 bits (116), Expect = 5e-21 Identities = 73/83 (88%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||||||||||| ||||||| || || Sbjct 83 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCC 24 Query 75 TCCCGAAGGTTAAGCTACCTACT 97 ||||||||||| ||| ||||| Sbjct 23 CCCCGAAGGTTAGACTAGCTACT 1 >seq3209 Length=1033 Score = 98.7 bits (108), Expect = 7e-19 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||| |||||||| | |||| || ||||| Sbjct 102 CCCTACGGCTACCTTGTTACGACTTCACCCCAGGCATGAATCCTACCGTGGGAATCGCCC 43 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCC 116 || | ||||| |||| |||||||| | ||||||||||| Sbjct 42 CCCTTACGGTTAGGCTAACTACTTCTGGTAAAACCCACTCCC 1 >seq552 Length=1692 Score = 91.5 bits (100), Expect = 1e-16 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 76 CCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGT 135 ||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 1 CCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTGT 60 Query 136 GTA 138 ||| Sbjct 61 GTA 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345566540520