Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq21 131 7e-28 seq7544 78.8 4e-12 >seq21 Length=10696 Score = 131 bits (144), Expect = 7e-28 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||| ||||||||||| ||| | ||||||||||| |||| ||||||||| Sbjct 5329 GGACCCGAAAGAGTGTGAACTATGCTTGAGGAAGGTGAAGCCAGGAGAAATTCTGGTGGA 5270 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| | |||||| ||| ||||||||||| ||||| || ||| |||||||||||| Sbjct 5269 GGCTTGTAGCGGTACTGACGTGCAAATCGTTCGTCTAACTTGAGTATAGGGGCGA 5215 Score = 77.0 bits (84), Expect = 1e-11 Identities = 108/148 (73%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||| | |||||| | |||| ||| |||||| | ||| | || || || Sbjct 6108 TCCACGAGTAGGAATGTTTGAAATTGCAT-TCTGAATGGGTGATAAGACGCATCCAAGGC 6050 Query 95 TAAATATTGGCCAG-AGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||| | || ||||||||||| ||||||| |||| ||||| || |||| ||| Sbjct 6049 TAAATATAAGTTAGGAGACCGATAGCATACAAGTACTGTGAAGGAAAGGTGCAAAGGACT 5990 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAA 181 ||| ||| || ||| ||||||| |||| Sbjct 5989 TTGAAAAAAGGGTT-AAAAGCATTTGAA 5963 >seq7544 Length=577 Score = 78.8 bits (86), Expect = 4e-12 Identities = 69/85 (81%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463 || ||||||||| ||||||||||||||||| |||| | || |||||| ||||||| | | Sbjct 453 CGACCCGTCTTGAAACACGGACCAAGGAGTTTAACGTATACGCGAGTCATTGGGTGATAA 512 Query 464 AACCCGTGCGCGTAATGAAAGTGAA 488 |||| ||||||||||||| || Sbjct 513 AACCTAAAGGCGTAATGAAAGTAAA 537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079778485850