Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq291 334 8e-90 seq160 127 2e-27 >seq291 Length=3003 Score = 334 bits (370), Expect = 8e-90 Identities = 190/193 (98%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2191 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 2132 Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 120 ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2131 GATGACTCGTCATCAGCTCTCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 2072 Query 121 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2071 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 2012 Query 181 TTAACCAGAAGTA 193 |||||||||||| Sbjct 2011 ATAACCAGAAGTA 1999 >seq160 Length=64135 Score = 127 bits (140), Expect = 2e-27 Identities = 137/178 (77%), Gaps = 9/178 (5%) Strand=Plus/Minus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 ||||||||||| |||||||| ||||||| ||| |||| |||||| | | |||| Sbjct 4029 CTGAAGCTTAGGAGCTTTTCCTGGAAGCGTGGTATCAGTGACTTCGCCTT---AAAGG-- 3975 Query 65 ACTCGTCATCAGCTCCCGGCCTTA--GAATCCCGGATTTACCTAAGATTCCAGCCTACCA 122 |||||| || | | ||| |||| ||||||||||||| || ||||||| | |||||| Sbjct 3974 -CTCGTC-TCGGTGCTCGGTCTTAAAGAATCCCGGATTTGCCAAAGATTCAAACCTACCT 3917 Query 123 CCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 |||| | |||||||||||||| | |||| |||||||||||||||||||||| Sbjct 3916 CCTTTCCCCCGGACAACCAACGCCGGGTACACCTAACCTTCTCCGTCCCTCCATCGCA 3859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518348137806