Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq242 585 7e-165 seq160 455 8e-126 seq552 421 2e-115 seq553 260 4e-67 seq2325 203 8e-50 seq5829 190 5e-46 seq2145 188 2e-45 seq4 111 4e-22 >seq242 Length=118535 Score = 585 bits (648), Expect = 7e-165 Identities = 376/408 (92%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 117516 TACCTGCAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 117457 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||||||||||||||||||||||||||||||||||||||||||||| | |||| || ||| Sbjct 117456 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTCGGAAAGAAAGATGT 117397 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGA-CTAGAGTGTGTCAG 181 |||||||| | ||||||| | |||| ||||||| | ||| | ||| |||||||||||||| Sbjct 117396 GAAATCCCAGAGCTTAACTTTGGAACTGCATTTTTAACTAC-CGAGCTAGAGTGTGTCAG 117338 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 |||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 117337 AGGGAGGTGGAATTCCGCGTGTAGCAGTGAAATGCGTAGATATGCGGAGGAACACCGATG 117278 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 117277 GCGAAGGCAGCCTCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 117218 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC 361 |||||||||||||||||||||||||||||||||||| |||||||| |||||||| || Sbjct 117217 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGCTGTTGGGGCCTTCG 117158 Query 362 TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 |||||||| || |||||||||||||||||||||||||||||| ||| Sbjct 117157 GGCCTTGGTAGCGCAGCTAACGCGTGAAGTTGACCGCCTGGGGAGTAC 117110 >seq160 Length=64135 Score = 455 bits (504), Expect = 8e-126 Identities = 347/409 (85%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 864 TACCCAAAGAATAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGTGC 923 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| ||||||||||||||||||||||||||| ||| |||||| |||| | | ||| Sbjct 924 AAGCGTTACTCGGAATTACTGGGCGTAAAGCGTGCGTAGGTGGTTGTTTAAGTCTGTTGT 983 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||| ||| ||||| ||||||||||||||| | | |||| ||||||||||||| ||| Sbjct 984 GAAAGCCCTGGGCTCAACCTGGGAATTGCAGTGGATACTGGGCGACTAGAGTGTGGTAGA 1043 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 ||| |||||||||| |||||||||||||||||||||| || ||||||||| | |||| Sbjct 1044 GGGTAGTGGAATTCCCGGTGTAGCAGTGAAATGCGTAGAGATCGGGAGGAACATCCATGG 1103 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||||||||| ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct 1104 CGAAGGCAGCTACCTGGACCAACACTGACACTGAGGCACGAAAGCGTGGGGAGCAAACAG 1163 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGG--GGATTTA 360 ||||||||||||||||||||||||||||||||||| |||| | |||||| | | || Sbjct 1164 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATGCGAACTGGATGTTGGGTGCAATTT 1223 Query 361 CTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | ||| || ||||||||||| ||||| ||||||||||| ||| Sbjct 1224 GGCACGCAGTATCGAAGCTAACGCGTTAAGTTCGCCGCCTGGGGAGTAC 1272 >seq552 Length=1692 Score = 421 bits (466), Expect = 2e-115 Identities = 337/402 (84%), Gaps = 3/402 (1%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct 964 AGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTT 905 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||||||||||||||||||||||| ||| ||| |||| |||| | |||||||||| Sbjct 904 AATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTCGTTAAGTTGGATGTGAAATCC 845 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGA-CTAGAGTGTGTCAGAGGGGGG 188 ||||||| |||||||||| |||||| |||| |||| ||||||| || |||||| || Sbjct 844 CCGGGCTCAACCTGGGAACTGCATTCAAAACTG-ACGAGCTAGAGTATGGTAGAGGGTGG 786 Query 189 TGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGG 248 ||||||| | ||||||| ||||||||||||||||| | |||||||||| ||||||||| Sbjct 785 TGGAATTTCCTGTGTAGCGGTGAAATGCGTAGATATAGGAAGGAACACCAGTGGCGAAGG 726 Query 249 CAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAG 308 | || ||||| | | |||||| || | | |||||||||||||||||||||||||||| Sbjct 725 CGACCACCTGGACTGATACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAG 666 Query 309 ATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-GATTTACTTCCTT 367 |||||||||||||||||||| |||||||| |||||||| |||||| | || ||| Sbjct 665 ATACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGGAGCCTTGAGCTCTT 606 Query 368 GGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || ||||||||| | |||||||||||||||||| ||| Sbjct 605 AGTGGCGCAGCTAACGCATTAAGTTGACCGCCTGGGGAGTAC 564 >seq553 Length=5624 Score = 260 bits (288), Expect = 4e-67 Identities = 307/412 (75%), Gaps = 4/412 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| | ||||||| | ||||||||| |||||||||||||||||||||||| ||| | | Sbjct 793 TACCGAAGGAATAAGGATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCC 852 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||| ||| |||| ||||| ||||| |||||| | |||| |||| || Sbjct 853 AAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTTATTAAGTCAGGGGT 912 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGA-CTAGAGTGTGTCAG 181 |||| | |||| |||| | | ||| ||| |||| | || || || | || Sbjct 913 GAAAGACGGTGGCTCAACCATCGCAGTGCCCTTGATACTG-ATGAGCTTGAATACACTAG 971 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 ||| || ||||| || ||||| ||||||||| ||||||||| ||||||| || Sbjct 972 AGGTAGGCGGAATGTGACAAGTAGCGGTGAAATGCATAGATATGTCACAGAACACCGATT 1031 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||||||||| || | | | ||||||| | ||||||||||||||||| |||||| Sbjct 1032 GCGAAGGCAGCTTACTATGGTGTTATTGACGCTGAGGCACGAAAGCGTGGGGATCAAACA 1091 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC 361 |||||||||||||||||||||||||||||||||||| ||| | |||| | ||| ||| Sbjct 1092 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAATACTCGCTGTTAGCGATATAC 1151 Query 362 TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATACTCCC 413 || | | ||| || |||| |||| || |||||||| ||| ||| Sbjct 1152 --AGTTAGCGGCTAAGCGAAAGCGTTAAGTATTCCACCTGGGGAGTACGCCC 1201 >seq2325 Length=420 Score = 203 bits (224), Expect = 8e-50 Identities = 293/419 (70%), Gaps = 51/419 (12%) Strand=Plus/Plus Query 38 GCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGC 97 |||||||||||||||||||||| |||||||||| |||||||| ||||||||||| | | Sbjct 1 GCAGCCGCGGTAATACGTAGGGCGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTC 60 Query 98 GCAGGCGGTTGTGT-AAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTG 156 | |||||||| ||| | | | |||||||||| |||| ||||| | |||| | | Sbjct 61 GTAGGCGGTT-TGTCGCGTCTGCTGTGAAATCCGGAGGCTCAACCTCCGGCCTGCAGTGG 119 Query 157 TGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGC 216 || | |||||||||| | || || | ||||||||| ||||||| ||| ||||| Sbjct 120 GTACGGGCAGACTAGAGTGCGGTAGGGGAGATTGGAATTCCTGGTGTAGCGGTGGAATGC 179 Query 217 GTAGATATGTGGA----------------------------------------GGAACAC 236 | |||||| ||| ||||||| Sbjct 180 GCAGATATCAGGAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAACAC 239 Query 237 CAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGC 296 | ||||||||||||| | ||||| ||||||||| | | |||||| ||||||||| Sbjct 240 CGATGGCGAAGGCAGATCTCTGGGCCGTAACTGACGCTGAGGAGCGAAAGGGTGGGGAGC 299 Query 297 AAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG-- 354 ||||||| ||||||||||||||||||||| || |||||| | |||||||||| ||| Sbjct 300 AAACAGGCTTAGATACCCTGGTAGTCCACCCCGTAAACGTTGGGAACTAGTTGTGGGGTC 359 Query 355 GATT-TAC---TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 ||| || |||| || ||| ||||||||| | ||||| ||||||||||| ||| Sbjct 360 CATTCCACGGATTCC---GTGACGCAGCTAACGCATTAAGTTCCCCGCCTGGGGAGTAC 415 >seq5829 Length=272 Score = 190 bits (210), Expect = 5e-46 Identities = 210/275 (76%), Gaps = 6/275 (2%) Strand=Plus/Minus Query 48 TAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 |||||||||||||||||||||| |||||||||||||||||||| || || |||||||| Sbjct 272 TAATACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGCGTAAAGAGTTCGTAGGCGGTT 213 Query 108 GTGTAA-GACAGGTGTGAAATCCCCGGGCTTAAC--CTGGGAATTGCATTTGTGACTGCA 164 ||| | | ||||||| || ||| ||| |||| ||||| | || | Sbjct 212 -TGTCGCGTCGTTTGTGAAAACCAGCAGCTCAACTGCTGGC--TTGCAGGCGATACGGGC 156 Query 165 CGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATAT 224 |||| |||| ||| || | ||||||||| ||||||| |||||||||| |||||| Sbjct 155 AGACTTGAGTACTGCAGGGGAGACTGGAATTCCTGGTGTAGCGGTGAAATGCGCAGATAT 96 Query 225 GTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAA 284 ||||||||||| |||||||||| | | ||||| ||||||||| | | ||||| Sbjct 95 CAGGAGGAACACCGGTGGCGAAGGCGGGTCTCTGGGCAGTAACTGACGCTGAGGAACGAA 36 Query 285 AGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 319 |||||||| ||| |||||||||||||||||||||| Sbjct 35 AGCGTGGGTAGCGAACAGGATTAGATACCCTGGTA 1 >seq2145 Length=12713 Score = 188 bits (208), Expect = 2e-45 Identities = 169/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 38 GCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGC 97 ||||||||||||||||| |||| || |||||| ||||| ||||||||||||||||| | Sbjct 12501 GCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGATTTACTGGGCGTAAAGCGCAC 12560 Query 98 GCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGT 157 | |||||| |||| |||| |||||||||| ||||| |||| |||| ||| |||| Sbjct 12561 GTAGGCGGACTATTAAGTCAGGGGTGAAATCCCGGGGCTCAACCCCGGAACTGCCTTTGA 12620 Query 158 GACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCG 217 |||| | || |||| | ||||| | |||||||||| |||||| ||||||| || Sbjct 12621 TACTGGTAGTCTTGAGTTCGAGAGAGGTGAGTGGAATTCCGAGTGTAGAGGTGAAATTCG 12680 Query 218 TAGATATGTGGAGGAACACCAATGGCGAAGGC 249 ||||||| |||||||||||| |||||||||| Sbjct 12681 TAGATATTCGGAGGAACACCAGTGGCGAAGGC 12712 >seq4 Length=49023 Score = 111 bits (122), Expect = 4e-22 Identities = 84/99 (85%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 9 AAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGT 68 ||||| |||| |||||||||| |||||||||||||||||||||||| |||| |||||| | Sbjct 23066 AAGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCAAGCAT 23125 Query 69 TAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTT 107 || ||| || ||||||||||||| || | |||| ||| Sbjct 23126 TATTCGTAAGGACTGGGCGTAAAGGGTATGTAGGCAGTT 23164 Score = 80.6 bits (88), Expect = 7e-13 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 266 ACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 325 ||||||||| | | ||||| || | ||||||||||||||||||| |||||||||||| | Sbjct 23329 ACTGACGCTGAGGTACGAAGGCATAGGGAGCAAACAGGATTAGAGACCCTGGTAGTCTAT 23388 Query 326 GCCCTAAACGAT 337 || |||||||| Sbjct 23389 GCAGTAAACGAT 23400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289466823008