Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq553 138 1e-30 seq242 89.7 5e-16 seq4 89.7 5e-16 seq1610 82.4 8e-14 seq291 82.4 8e-14 >seq553 Length=5624 Score = 138 bits (152), Expect = 1e-30 Identities = 138/175 (79%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| ||| |||| || || |||||| ||| |||||||||| || || Sbjct 4024 CGCAAACCGACACAGGTATCCGGGAAGAGAATTCTAAGGTGCTCGAGTGAATCATGGCTA 4083 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||||| |||||| || |||||||||||||||| ||||| | || || ||| | Sbjct 4084 AGGAACTCGGCAAAATGGCCCTGTAACTTCGGGA-GAAGGGGCGCT-GGTAGCAATATCA 4141 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | ||||| ||| ||| |||||| ||||||||||||||||||| |||| ||| || Sbjct 4142 -GCCGCAGTGAAAAGGCCCAGGCGACTGTTTAACAAAAACACATGGCTTTGCAAA 4195 >seq242 Length=118535 Score = 89.7 bits (98), Expect = 5e-16 Identities = 80/98 (82%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| || | |||| ||||||| | |||||||||||| ||| ||| || Sbjct 114223 CGCAAACCGACACAGGTGGACGGGATGAATATTCCAAGGCGCTTGAGAGAACTCA-GGAG 114165 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||| |||||| ||| | |||||||||||| || Sbjct 114164 AAGGAACTCGGCAAATTGATACCGTAACTTCGGGAGAA 114127 >seq4 Length=49023 Score = 89.7 bits (98), Expect = 5e-16 Identities = 89/116 (77%), Gaps = 6/116 (5%) Strand=Plus/Plus Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGG 140 |||||||| |||||| |||| |||||||||||||| |||| || ||| ||| | Sbjct 34151 AAGGAACTCGGCAAATTGACTCTGTAACTTCGGGAGAAAGAGTGCCT------CAATTGA 34204 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||| | ||| |||||| ||| ||||||||| |||||||||||||| ||| || Sbjct 34205 AGGCCATAGAAAATAGGGAGTGGCGACTGTTTAATAAAAACACAGGGCTCTGCAAA 34260 >seq1610 Length=2511 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| ||||| || | | ||| || |||| |||||||||||| ||| || | |||| Sbjct 1911 AAACCGACACTGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACTGCGTTGAAGG 1852 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 |||| |||||| || | |||||||||| | || | | ||| ||| || ||| Sbjct 1851 AACTCGGCAAATTGCACGCGTAACTTCGGAAGAAGCGTGACCCTTATGTACGCAAGTATG 1792 Query 139 GGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||| ||| ||| ||| || |||||||| ||||||||||||||| ||| || Sbjct 1791 TGAGGGTGGCACAGACCAGGGGGTAGCGACTGTTTACCAAAAACACAGGGCTCTGCGAA 1733 >seq291 Length=3003 Score = 82.4 bits (90), Expect = 8e-14 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || || |||| || |||| |||||||||||| ||| ||| ||| Sbjct 2207 CAAACCGACACAGGTGGTTGGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAG 2266 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | | |||||||||||| || Sbjct 2267 GAACTAGGCAACATGGCACCGTAACTTCGGGAGAA 2301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531146857258