Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq552 544 2e-152 seq160 515 1e-143 seq242 434 3e-119 seq553 412 1e-112 seq4711 241 4e-61 seq994 206 8e-51 seq4 163 9e-38 seq3588 123 7e-26 >seq552 Length=1692 Score = 544 bits (602), Expect = 2e-152 Identities = 423/500 (85%), Gaps = 8/500 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 566 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 507 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||||||||||||||||||||||||| |||||||||| ||| | || Sbjct 506 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGCCTTGACATCCAATGAACTTTC 447 Query 121 TAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 |||||||||| ||| |||||||| ||| | |||||||| ||||||| ||||||| Sbjct 446 TAGAGATAGATTGGTG---CCTTCGGGA-ACATTGAGACAGGTGCTGCATGGCTGTCGTC 391 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct 390 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTGTCCTTAGTT 331 Query 239 GCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 ||| || ||| | ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 330 ACCAGCACGTTATGGTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGG 271 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| |||||||| |||||||| |||||| | |||||||||||||||||||||||| | Sbjct 270 GGATGACGTCAAGTCATCATGGCCCTTACGGCCTGGGCTACACACGTGCTACAATGGTCG 211 Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416 |||| |||| || || ||||||||| ||| ||||||| ||| | || ||| ||| Sbjct 210 GTACAGAGGGTTGCCAAGCCGCGAGGTGGAGCTAATCCCAGAAAACCGATCGTAGTCCGG 151 Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATG 476 || | |||||||||||||||| ||||| ||||||||||||||||| ||||| ||| Sbjct 150 ATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGAATCAGAATG 91 Query 477 CTACGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 90 TCGCGGTGAATACGTTCCCG 71 >seq160 Length=64135 Score = 515 bits (570), Expect = 1e-143 Identities = 419/501 (84%), Gaps = 9/501 (2%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| |||||||||||||||||| || Sbjct 1270 TACGGTCGCAAGACTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGTAT 1329 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||||||||||||||||||| ||||||||| || | || Sbjct 1330 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATGTCGAGAACTTTC 1389 Query 121 TAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 |||||| || ||| |||||||| || ||||||| ||||||| ||||||| Sbjct 1390 CAGAGATGGATTGGTG---CCTTCGGGAACTCGAAC-ACAGGTGCTGCATGGCTGTCGTC 1445 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1446 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCTTAGTT 1505 Query 239 GCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 |||| || ||| | |||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 1506 GCCAGCACGTAATGGTGGGAACTCTAAGGAGACCGCCGGTGACAAACCGGAGGAAGGTGG 1565 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| |||||||| |||||||| |||||| || ||||||||||||| ||||||||| Sbjct 1566 GGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTACTACAATGGTAG 1625 Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416 ||| ||||| || || |||||||| ||||| ||||||| ||| ||||||| ||| Sbjct 1626 GGACAGAGGGCTGCAAACCCGCGAGGGCAAGCCAATCCCAGAAACCCTATCTCAGTCCGG 1685 Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA-T 475 |||| |||||||||||||||| |||||| ||||||||||||||||| ||||||||| | Sbjct 1686 ATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATT 1745 Query 476 GCTACGGTGAATACGTTCCCG 496 ||| ||||||||||||||||| Sbjct 1746 GCTGCGGTGAATACGTTCCCG 1766 >seq242 Length=118535 Score = 434 bits (480), Expect = 3e-119 Identities = 397/497 (80%), Gaps = 7/497 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct 117112 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGAT 117053 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTG-ACCCCT 119 |||| ||||||||| |||||||||| ||||||||| | |||||||| |||| | | Sbjct 117052 GTGGATTAATTCGATGCAACGCGAAAAACCTTACCTACCCTTGACATG-TCTGGAATTCC 116994 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 |||||| | | | | | | || | ||||||| ||||||| |||||||| Sbjct 116993 GAAGAGATTTGGAAGTGCTCGCAAGAGAACCGGAACACAGGTGCTGCATGGCTGTCGTCA 116934 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 116933 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTG 116874 Query 240 CCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGA 299 | | | ||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 116873 CTACGA--AAG---GGCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGA 116819 Query 300 CGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATA 359 |||||||| || ||||| |||||||| | ||||| ||||||| |||||||| | | Sbjct 116818 TGACGTCAAGTCCTCATGGCCCTTATGGGTAGGGCTTCACACGTCATACAATGGTCGGGA 116759 Query 360 CAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATT 419 || |||| || || |||||||| ||| ||||||| ||| | || ||| ||||| Sbjct 116758 CAGAGGGTCGCCAACCCGCGAGGGGGAGCCAATCCCAGAAACCCGATCGTAGTCCGGATC 116699 Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479 | |||||||||||||||| ||||| ||||||||||||||||| |||||||||| Sbjct 116698 GCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGTCG 116639 Query 480 CGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 116638 CGGTGAATACGTTCCCG 116622 >seq553 Length=5624 Score = 412 bits (456), Expect = 1e-112 Identities = 398/502 (79%), Gaps = 13/502 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| |||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 1195 TACGCCCGCAAGGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAGCAT 1254 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| | |||||| |||||||||| ||||| | ||| || Sbjct 1255 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAAAGTTAGTGAATGATC 1314 Query 121 TAGAGATAGAGGTTTCCCCT-TCGGGGGACAGAGTGAC-AGGTGATGCATGGTTGTCGTC 178 |||||||||| | | || ||| | || ||||| ||||||| ||||||| Sbjct 1315 TAGAGATAGATCAGTGAGCAATC-----ACAC-GAAACTAGGTGCTGCATGGCTGTCGTC 1368 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 |||||||| |||||| |||||||||||||||||||||||||||||||| || | |||||| Sbjct 1369 AGCTCGTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATGTTTAGTT 1428 Query 239 GCCATCA--TTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTG 295 |||| || ||||| |||| ||||||| ||||||| ||| ||||| | |||||||| | Sbjct 1429 GCCAGCACGTTAAGGTGGGGACTCTAAACAGACTGCCTGTG-CAAACAGAGAGGAAGGAG 1487 Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||||||||||| |||||||| |||||| | |||||||||||||||||||||||| Sbjct 1488 GGGACGACGTCAAGTCATCATGGCCCTTACGTCCGGGGCTACACACGTGCTACAATGGAT 1547 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 |||| |||||||| | || | ||||| |||| || |||| ||| ||||||| Sbjct 1548 GGTACAGAGGGCAGCAAGCTGGCAACAGCAAGCGAATCTCAAAAAGCCATTCACAGTTCG 1607 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-A 474 ||| | |||||||||||||| ||||| |||| ||||||||||||| |||||| | Sbjct 1608 GATAGAGGTCTGCAACTCGACCTCTTGAAGTTGGATTCGCTAGTAATCGCGTATCAGCAA 1667 Query 475 TGCTACGGTGAATACGTTCCCG 496 || ||||||||||||||||| Sbjct 1668 TGACGCGGTGAATACGTTCCCG 1689 >seq4711 Length=256 Score = 241 bits (266), Expect = 4e-61 Identities = 212/258 (82%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 209 CCGCAACGAGCGCAACCCTTAAGCTTA-GTTGCCATCA--TTAAGTTGGGCACTC-TAAG 264 |||||||||||||||||| || |||| ||||||| || ||| | |||| |||| |||| Sbjct 1 CCGCAACGAGCGCAACCCCTAT-CTTATGTTGCCAGCACGTTATGGTGGGGACTCGTAAG 59 Query 265 TTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTA 324 ||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct 60 A-GACTGCCGGGGTCAACTCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGCCCCTTA 118 Query 325 TGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTC 384 || ||||| ||||| ||||||||||| || |||| ||||| |||| |||| ||||| Sbjct 119 TGTCCAGGGCTTCACACATGCTACAATGGCCAGTACAGAGGGCTGCGAGACCGTGAGGTG 178 Query 385 AAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAA 444 ||| |||||| ||||| || ||||||||||||| | |||||||||||||| |||| Sbjct 179 GAGCGAATCCCTTAAAGCTGGTCTCAGTTCGGATCGGGGTCTGCAACTCGACCCCGTGAA 238 Query 445 GCTGGAATCGCTAGTAAT 462 | ||| ||||||||||| Sbjct 239 GTCGGAGTCGCTAGTAAT 256 >seq994 Length=2704 Score = 206 bits (228), Expect = 8e-51 Identities = 158/187 (84%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 287 AGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCT 346 ||||||||||||| |||||||||||||||||||||||||| ||||||| ||| | |||| Sbjct 2704 AGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGTCTTGGGCTTCACGCATGCT 2645 Query 347 ACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTT 406 ||||||| | |||||||||| || | |||||||||| ||| ||||||| |||| | | Sbjct 2644 ACAATGGCCGGTACAAAGGGCTGCAATACCGCGAGGTGGAGCGAATCCCAAAAAGCCGGT 2585 Query 407 CTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTA 466 | |||||||||||| |||||||||||||| |||||| ||| ||||||||||||| | Sbjct 2584 CCCAGTTCGGATTGAGGTCTGCAACTCGACCTCATGAAGTCGGAGTCGCTAGTAATCGCA 2525 Query 467 GATCAGC 473 ||||||| Sbjct 2524 GATCAGC 2518 >seq4 Length=49023 Score = 163 bits (180), Expect = 9e-38 Identities = 337/494 (68%), Gaps = 23/494 (5%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 ||||| |||||| || |||||||||||||||||| | || || ||||| ||||||||| Sbjct 23459 TACGATCGCAAGATTAAAACTCAAAGGAATTGACTGAGATTTGCGCAAGCAGTGGAGCAT 23518 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC---TCTGACCC 117 || ||||||||||| ||| |||| || |||||||| | |||| | | | | | Sbjct 23519 GTAGTTTAATTCGATATAACACGAAAAATCTTACCAATTTTTGAATTATGTATATTAACA 23578 Query 118 CTC-TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCG 176 | |||| | | | | | | || | ||||| | ||||||| ||||| Sbjct 23579 ATGGTAGAATGAAAAGCTACATAAAAATAAG-CATAAA-ACAGGAGCTGCATGGCTGTCG 23636 Query 177 TCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAG 236 |||| ||||| || || |||| |||||| ||| | ||| || || ||||| |||| Sbjct 23637 TCAGTTCGTGCTGTTAGGTGTTAGGTTAATTCCTTTAGCGAACGTAATCCTTATATTTAG 23696 Query 237 TTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGA---GGAAGG 293 || | | |||| |||| | | || | |||| | ||||| Sbjct 23697 TTACGAA----AAGT--------CTAAATAGT-TGAAAATAACAAGTTTTATTTGGAAGT 23743 Query 294 TGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGG 353 |||||| || ||||| || ||| || |||| | |||||||||| | ||||||||||| Sbjct 23744 TGGGGATGATGTCAAGTCGGTATGGCCTTTATAAATTGGGCTACATATGTGCTACAATGA 23803 Query 354 ACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTT 413 | ||||| || ||||||| | ||| | ||||||||| | ||| | || | ||| Sbjct 23804 TTAGAACAAAAGGGAGCGAAAGTGTGAGCTGGAGCAAATCCTAAAAACTAATT-TTAGTA 23862 Query 414 CGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC 473 | |||| |||| ||||||| ||||| |||||| |||||||||||||||| || Sbjct 23863 TGAATTGATTTCTGAAACTCGAAATCATGAAAGTGGAATTGCTAGTAATCGTAGATTAGT 23922 Query 474 ATGCTACGGTGAAT 487 ||||| |||||||| Sbjct 23923 ATGCTTCGGTGAAT 23936 >seq3588 Length=613 Score = 123 bits (136), Expect = 7e-26 Identities = 105/128 (82%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 333 GCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAAT 392 ||||||||||||||||||||| ||| ||||||||| ||||||||||| ||| ||| Sbjct 1 GCTACACACGTGCTACAATGGTGGTGACAGTGGGCAGCGAGACCGCGAGGTCGAGCTAAT 60 Query 393 CCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAAT 452 | | |||| | |||||||||||||| | |||||||||||| | |||||| |||||| Sbjct 61 CTCCAAAAGCCAT-CTCAGTTCGGATTGCACTCTGCAACTCGAGTGCATGAAGTTGGAAT 119 Query 453 CGCTAGTA 460 |||||||| Sbjct 120 CGCTAGTA 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503844681920