Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq21 149 1e-33 seq8308 77.0 5e-12 >seq21 Length=10696 Score = 149 bits (164), Expect = 1e-33 Identities = 103/117 (88%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 7601 CTATTTAGTAGGTAGAGGTCTCGTCCGTTATCGGAATTGACCAGACAAATCACTCCACCA 7660 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||| |||||||||||||| ||||||||| |||| | || | | |||||| Sbjct 7661 ACTAAGAACGACCATGCACCACCACTTATAGAATCATGAAAAATCTTTTAGTCTGTC 7717 Score = 91.5 bits (100), Expect = 2e-16 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 7383 TCATTGTAACGCGCGTGCAGCCCAAGGTATCTAAGGGCATCACAGACCTGTTATTGCCTC 7442 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 |||||| || || | |||||||||||||||| Sbjct 7443 CGACTTCCCCCCACTTGAGGTGGGTAGTCCCTCTAAGAAG 7482 >seq8308 Length=211 Score = 77.0 bits (84), Expect = 5e-12 Identities = 47/50 (94%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTG 65 |||||||||||||||||| |||| | |||||||||||||||||||||||| Sbjct 50 TCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796720285887