Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001151.1 Length=269 Score E Sequences producing significant alignments: (Bits) Value seq17 273 3e-71 >seq17 Length=40327 Score = 273 bits (302), Expect = 3e-71 Identities = 229/269 (85%), Gaps = 9/269 (3%) Strand=Plus/Minus Query 2 CCGCAGAAACGCCGGGTTTCCACAGGCGTACCGGCGCCGGCCCCTTCGCCCTTCGGGCAG 61 ||||| |||||||||||| |||||| | |||||||| |||||||| |||||| ||||| Sbjct 34672 CCGCA-AAACGCCGGGTT-CCACAGATGCACCGGCGCGGGCCCCTT-GCCCTT-GGGCAA 34617 Query 62 TTCGGGCCAACAGATCGTTCGGCCTTCGGCGGAATCGGTCATAGGGCATCTCCT-GTGTC 120 || | ||||||| || || |||||| ||| ||||||||||| | | ||||| ||||| Sbjct 34616 TT-GCGCCAACAACTCATT-GGCCTT-GGCCGAATCGGTCATGCTGTA-CTCCTTGTGTC 34561 Query 121 TTACTGATCGCTCATGCCCAGCAGGCCACGGGCGTATTTGGCCAGGGGGCGGGCGATCAG 180 |||||||||||||||||||| ||||| || ||||| | |||||||| | ||||||| Sbjct 34560 TTACTGATCGCTCATGCCCAACAGGCTGCGCGCGTAGTGCGCCAGGGGCTTGCCGATCAG 34501 Query 181 GTCTTCTGGCTTGTTGTCGTGGAACGTCAGTAAACCGCCACGGCTGCGAATACGCACAGT 240 ||| ||||||||||||||||||||||||||||||||||||||||| | || |||||||| Sbjct 34500 GTCATCTGGCTTGTTGTCGTGGAACGTCAGTAAACCGCCACGGCTATGGATGCGCACAGT 34441 Query 241 ATCAATCAAATACTGGGTGCTGGTCTCGA 269 |||||||||||||||||| |||||||||| Sbjct 34440 ATCAATCAAATACTGGGTACTGGTCTCGA 34412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 761523807394