Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001197.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1508 143 4e-32 >seq1508 Length=10100 Score = 143 bits (158), Expect = 4e-32 Identities = 200/272 (74%), Gaps = 9/272 (3%) Strand=Plus/Plus Query 10 CCCGGCGGCTTGCGCCAGTTCGCCACAGGCCACGCTCGGTGGCTTTCTTGCGCCAGGCTG 69 |||| || | || ||||| | |||| |||||||||||||| || | || |||||||| | Sbjct 3420 CCCGCCGCCATG-GCCAGCT-GCCAAAGGCCACGCTCGGTAGCCTCCT-GCGCCAGGGTC 3476 Query 70 ACGTGGGCAAATCCGCAAAGGGCGAGGGCGCGTTGATAGCGGGCGCAAAGTGCAGCAGCG 129 ||||||| || || || || ||| || || || ||||||| ||| ||| | | | Sbjct 3477 ACGTGGGGGAAGCCACAGAGTTGGAGTGCACGCTGGTAGCGGGTGCAGAGTTGGGGTGTG 3536 Query 130 CCGACCAGGATGA--TCG-GCTGATGTTTGGCC--GAATCTG-GCAAGCCGGCGAGCTCA 183 |||||||||| || ||| |||| || |||| | | || ||| ||||| || || Sbjct 3537 CCGACCAGGACGATGTCGCGCTGCTGGTTGGGCTTGCGAGTGCGCAGGCCGGTCAGTTCG 3596 Query 184 TGGCCGATGAGCAGGCCAGACAGGTAATCGGGTTGCTGGTCGGGCGCCAGCTGCGCGGTC 243 |||||||| | ||| || ||||| || || ||||||| ||| |||||||||| ||||| Sbjct 3597 TGGCCGATCAACAGCCCGGACAGATAGTCCGGTTGCTCGTCAGGCGCCAGCTCGCCGGTC 3656 Query 244 AGCCCAAGGGTACGGGCACTGAACAGGGTCGA 275 | || |||| || |||||||||| | |||| Sbjct 3657 AATCCCAGGGAGCGTGCACTGAACAAGTTCGA 3688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780721886572