Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001212.1 Length=311 Score E Sequences producing significant alignments: (Bits) Value seq106 356 4e-96 >seq106 Length=35866 Score = 356 bits (394), Expect = 4e-96 Identities = 268/313 (86%), Gaps = 4/313 (1%) Strand=Plus/Plus Query 1 TCGAGCTGTATTTTTTCACCCGCGTTTCTGGCTGTTATGGCTGGGGCTCGGCCTGCTGTG 60 |||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||| Sbjct 33685 TCGAGCTGTATTTTTTCATCCGCGCTTCTGGCTGTTATGGCTGGGGCTGGGTTTGCTGTG 33744 Query 61 GCTGGTCACCCAGTTGCCCTACCGTGCGCTGTTGACCATTGGTC--GCCTGCTGGGTGCG 118 |||| | |||||||| ||||| || | || ||||| | |||| |||| ||| Sbjct 33745 GCTGATTGTGCAGTTGCCGTACCGGGCTTTACTGGGGATTGGCCGTGCCT--TGGGGGCG 33802 Query 119 GGGATGTACCGTGTGGCCGGCGAACGCCGCCGCATCGCCGCGCGAAACCTGGAACTGTGC 178 || |||||||| |||||||| ||||| || || |||||||| |||||||||||||||||| Sbjct 33803 GGAATGTACCGGGTGGCCGGTGAACGTCGACGTATCGCCGCACGAAACCTGGAACTGTGC 33862 Query 179 TTCCCGGAAAAATCCGCGAAAGAGCGTAAACATTTGCTTAAAGAAAACTTTGCCTCCACC 238 ||||||||||| ||||| || ||||||||||||||||| || |||||||||||||||||| Sbjct 33863 TTCCCGGAAAAGTCCGCTAACGAGCGTAAACATTTGCTCAAGGAAAACTTTGCCTCCACC 33922 Query 239 GGCATCGCCTTCTTTGAGATGGCCATGAGCTGGTGGTGGTCGCGCCAGCGCCTGGCGCGC 298 |||||||| ||||| |||||||||||||||||||||||||| | ||||||||||||| Sbjct 33923 GGCATCGCGTTCTTCGAGATGGCCATGAGCTGGTGGTGGTCCAAGCCGCGCCTGGCGCGC 33982 Query 299 CTGGCCCACGTCG 311 |||||||| |||| Sbjct 33983 CTGGCCCATGTCG 33995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 892707800544