Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001228.1 Length=576 Score E Sequences producing significant alignments: (Bits) Value seq544 500 3e-139 >seq544 Length=76415 Score = 500 bits (554), Expect = 3e-139 Identities = 467/594 (79%), Gaps = 22/594 (4%) Strand=Plus/Plus Query 3 ACCCCGAGGTCACGGCGGCCGACCTGAAGCTGGCCCTGGCCGAGATGGAGCAGTTCTACG 62 |||||| | ||| || | ||||| |||| |||||| |||||| ||||||||| | Sbjct 40595 ACCCCGGGATCAGCGCCGAGGACCTCAAGCAGGCCCTCGCCGAGCGCGAGCAGTTCCTGG 40654 Query 63 ACGTGCAACCGTCTGAGCTTGAGCAGCTCGATCCACGCG-GCGCAGGGCCATGCACGGCG 121 |||| ||| ||||| || |||| |||||| || ||| || | |||| ||||| Sbjct 40655 ACGTTACCCCGCAGGAGCTGGAAGAGCT-GATCCAGGCCAGCG-AGCGGTATGCCCGGCG 40712 Query 122 GCGCAGCATCGGCGAGGTGCTCAGTCGCCGTG-------------------CATAAATGC 162 ||||| |||||||| ||| || |||| | || |||||| Sbjct 40713 GCGCACCATCGGCGCGGTTTTCCAGCGCCAGGGCCAGCCTCCTCCATAAGGCAAAAATGC 40772 Query 163 AATAACGACCTGCAGGATTCCCCGGTGTACTGGGCAAATGTGCACTGGTAGGATCGCAAG 222 || ||||||||||| |||||| |||||||||||||| |||||||||| |||||| || Sbjct 40773 AAAAACGACCTGCATGATTCCGACTTGTACTGGGCAAATTTGCACTGGTACGATCGCGAG 40832 Query 223 AAGGTTCGTCCCCGAACATCTTGATAAAGAACAATAAAAGCAGGGAGTTAGCGATGACTG 282 | |||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 40833 ATGGTTCGCCCGCGAACATCTTGATAAAGAACAATAAAAGCAGGGAGTTAGAGATGACTG 40892 Query 283 CTCAGGTTTCATCCGAGGCAAGCCACACCGACCATCTTCAAGCCGACATACTCGCCGAAG 342 ||||||||||||||||||||||| | ||| | | |||| ||| | || || | | Sbjct 40893 CTCAGGTTTCATCCGAGGCAAGCAGCGCCGGGATTGTGCAAGACGAGGTCCTGGCGCACG 40952 Query 343 TCCGCAACCATATCGGCCACCTCACCCTCAACCGCCCCGCCGGCCTGAACGCCATTACCC 402 | ||||||||||| |||||||| |||||||| |||||||| ||||| |||||| | |||| Sbjct 40953 TACGCAACCATATTGGCCACCTGACCCTCAATCGCCCCGCAGGCCTTAACGCCCTCACCC 41012 Query 403 TGGACATGGTCCGCAGCCTGAGCCACCACCTGCAGGCCTGGGCCGACGATCCCACGGTGT 462 ||||||||||||||||||| |||| || ||||||| ||||| ||||||||| |||| Sbjct 41013 TGGACATGGTCCGCAGCCTCAGCCGGCATTTGCAGGCGTGGGCGGACGATCCCCAGGTGC 41072 Query 463 ATGCCGTGGTCCTGCGCGGCGCCGGGGAAAAAGCCTTCTGCGCGGGCGGCGATATCCGTT 522 |||||||||| ||||||| ||||| ||||||||||||||||| |||||||| || || | Sbjct 41073 ATGCCGTGGTGTTGCGCGGTGCCGGTGAAAAAGCCTTCTGCGCCGGCGGCGACATTCGCT 41132 Query 523 CCTTGCATGACAGTTTCAAGAGCGGCGACACCCTGCACGAAGACTTCTTTGTCG 576 | || | ||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct 41133 CGCTGTACGACAGCTTCAAGAGCGGCGACACCCTCCACGAAGACTTCTTCGTCG 41186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1740620227584