Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001232.1 Length=307 Score E Sequences producing significant alignments: (Bits) Value seq234 282 7e-74 seq202 91.5 3e-16 >seq234 Length=62246 Score = 282 bits (312), Expect = 7e-74 Identities = 246/306 (80%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 2 GAAATCGACGATAAAGAAGTCACACTCGCCCACGGCCCCTTCAAGACACTGGGCATGCAG 61 || ||| |||| ||||||||||| ||||||||||| |||||||||||| |||| |||| Sbjct 54218 GAGATCAACGACAAAGAAGTCACGCTCGCCCACGGTCCCTTCAAGACATTGGGTATGCCA 54159 Query 62 GGCATGACGATGACGTTTCCACTTGCCAATCCTACCCTGATTCAGGGTCTGAAAACGGGC 121 |||||||||||||| || || || |||| |||| | ||||| |||| || ||||||||| Sbjct 54158 GGCATGACGATGACTTTCCCTCTCGCCACTCCTGCTCTGATGAAGGGCCTAAAAACGGGC 54099 Query 122 GACAAGGTTCGGGTCGCGGTGAGCCAAACCGACGATGGATTGCGTGTCGAACGTCTAGAT 181 |||||||||||| |||| || ||||| || |||||||| ||||||| |||||||| || Sbjct 54098 GACAAGGTTCGGATCGCTGTTAGCCAGACGGACGATGGTCTGCGTGTTGAACGTCTGGAA 54039 Query 182 AAAACGGGAGGTCAGCCATGATCGCTGCCCTCATCCGTTGGTCTGTTGCCAACCGCTTTT 241 | || || |||||||||| || ||||| || || ||||| || |||||||||||| Sbjct 54038 CGCTCTGGGGGCCAGCCATGATTGCGGCCCTTATTCGCTGGTCGGTGGCCAACCGCTTTC 53979 Query 242 TGGTGCTGTTGGCGACACTTTTCGTCACAGCTTGGGGCATCTGGTCAGTTCAGAACACAC 301 | ||| || ||||||| || |||||||| || ||||| |||||| | ||||| | || | Sbjct 53978 TTGTGTTGCTGGCGACGCTGTTCGTCACGGCATGGGGGATCTGGGCGGTTCAAAGTACGC 53919 Query 302 CAATCG 307 | |||| Sbjct 53918 CCATCG 53913 >seq202 Length=127504 Score = 91.5 bits (100), Expect = 3e-16 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 183 AAACGGGAGGTCAGCCATGATCGCTGCCCTCATCCGTTGGTCTGTTGCCAACCGCTTTTT 242 || |||||| | ||||||||||| | || || ||||| || |||||||||||||| Sbjct 15933 AACCGGGAGCCCGGCCATGATCGCCCTGTTGATTCGCTGGTCGGTGGCCAACCGCTTTTT 15874 Query 243 GGTGCTGTTGGCGACACTTTTCGTCACAGCTTGGGGCATCTGGTCAGTTCAGAACACACC 302 |||| |||||||||| | ||||| || || ||||| | ||||| | |||||||| || Sbjct 15873 GGTGTTGTTGGCGACTTTATTCGTGACGGCCTGGGGTTTGTGGTCGATCCAGAACACCCC 15814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 879909122400