Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001307.1 Length=477 Score E Sequences producing significant alignments: (Bits) Value seq3408 104 7e-20 >seq3408 Length=5264 Score = 104 bits (114), Expect = 7e-20 Identities = 206/303 (68%), Gaps = 4/303 (1%) Strand=Plus/Plus Query 11 GGACGGTAATCCAGTGGTTGCCGCTGCCAACCCATTGCGCAGTGTAAAGAGCGATGGTTC 70 ||| ||| | | || || ||||| |||||||| |||| || || |||| |||| | Sbjct 1090 GGATGGTTACACTGTCGTCGCCGCCGCCAACCCGCTGCGAAGCGTGAAGACGGATGC--C 1147 Query 71 GGCAATCTCGGCATTGTTGACG--AGCATTCATTCGCCGGTGGTGTTGGTCGGCCACTCC 128 | || || ||| || || ||||| | || || ||| |||||||||| ||| Sbjct 1148 GACAGCGTCCGCAGCCTTCTCGGTAGCATCACGACACCCGTCGTGCTGGTCGGCCATTCC 1207 Query 129 TATGGCGGCAACGTTATCAGTGACGCGGCCAACGATCATGCAAACGTCAAAGCCCTGGTT 188 |||||||||| || ||||| ||||||| |||| || | || || || || ||||| Sbjct 1208 TATGGCGGCATGGTGATCAGCAACGCGGCGAACGGCCAGTCGAATGTGAAGGCACTGGTC 1267 Query 189 TACGTCAGTGCGTTTGCACCTGAGGCCGGGGAAACCGTCGCCGGGCTGGCCGGCAAATTC 248 |||||| || ||||| || || || || || | | | | || | | |||| ||| Sbjct 1268 TACGTCGCGGCCTTTGCTCCGGAAGCTGGAGAGAATGCGGGTGCTCTCGACAGCAAGTTC 1327 Query 249 CCGGGCAGTACGCTGGGCCCAACGCTGGCTGCGCCTGTACCGCTGGCCGATGGGGGCAAG 308 || || || ||| || || | ||||| |||||||| |||||| | | || ||| | Sbjct 1328 CCAGGAAGCGTGCTTGGTCCCGCCCTGGCGGCGCCTGTGCCGCTGCCTGGCGGCGGCCAT 1387 Query 309 GAC 311 ||| Sbjct 1388 GAC 1390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1423852943520