Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001377.1 Length=151 Score E Sequences producing significant alignments: (Bits) Value seq202 192 4e-47 seq57 116 3e-24 seq78 111 1e-22 >seq202 Length=127504 Score = 192 bits (212), Expect = 4e-47 Identities = 133/151 (88%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 1 CGAAAATTGCTGAAGATGCCATCGCCCAAGTGCGCGCCCAGGTCGGCACTGACAACGTAT 60 |||| || |||||||| ||||||||| | || || |||||||||||||| |||||||| Sbjct 33557 CGAAGATCGCTGAAGACGCCATCGCCAACGTACGTGCCCAGGTCGGCACCGACAACGTCC 33498 Query 61 TGCTTGGCCTGTCCGGCGGCGTTGACTCCTCGGTTGTAGCGGCACTGCTGCACAAGGCCA 120 |||| |||||||||||||||||||||||||| || || ||||| |||||||||||||||| Sbjct 33497 TGCTGGGCCTGTCCGGCGGCGTTGACTCCTCCGTGGTTGCGGCGCTGCTGCACAAGGCCA 33438 Query 121 TCGGCGACCAACTGACCTGCGTGTTTGTCGA 151 ||||||||||||||||||| || || ||||| Sbjct 33437 TCGGCGACCAACTGACCTGTGTCTTCGTCGA 33407 >seq57 Length=417080 Score = 116 bits (128), Expect = 3e-24 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 15 GATGCCATCGCCCAAGTGCGCGCCCAGGTCGGCACTGACAACGTATTGCTTGGCCTGTCC 74 || ||| |||||| | |||| ||||||||||| ||| | || | || ||||||||| Sbjct 196720 GAAGCCGTCGCCCGCATCCGCGAGCAGGTCGGCACCGACGAAGTCATCCTGGGCCTGTCC 196661 Query 75 GGCGGCGTTGACTCCTCGGTTGTAGCGGCACTGCTGCACAAGGCCATCGGCGACCAACTG 134 |||||||| || || ||||| | || || ||| | |||||||||||||||||||| || Sbjct 196660 GGCGGCGTCGATTCGTCGGTGGCTGCCGCGCTGATCCACAAGGCCATCGGCGACCAGCTC 196601 Query 135 ACCTGCGTGTTTGTCGA 151 |||||||| || ||||| Sbjct 196600 ACCTGCGTCTTCGTCGA 196584 >seq78 Length=82074 Score = 111 bits (122), Expect = 1e-22 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 21 ATCGCCCAAGTGCGCGCCCAGGTCGGCACTGACAACGTATTGCTTGGCCTGTCCGGCGGC 80 ||||||| ||||||| | ||| ||| ||| | || | || ||||||||||||||| Sbjct 2527 ATCGCCCGCGTGCGCGAGCTGGTGGGCGATGATGAAGTGATCCTGGGCCTGTCCGGCGGC 2468 Query 81 GTTGACTCCTCGGTTGTAGCGGCACTGCTGCACAAGGCCATCGGCGACCAACTGACCTGC 140 || || || || || || || || |||||||||||||| ||||||||| | || |||||| Sbjct 2467 GTCGATTCGTCCGTCGTGGCCGCGCTGCTGCACAAGGCGATCGGCGACAAGCTCACCTGC 2408 Query 141 GTGTTTGTCGA 151 ||||| ||||| Sbjct 2407 GTGTTCGTCGA 2397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383961583560