Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001383.1 Length=561 Score E Sequences producing significant alignments: (Bits) Value seq883 529 6e-148 >seq883 Length=31349 Score = 529 bits (586), Expect = 6e-148 Identities = 456/562 (81%), Gaps = 2/562 (0%) Strand=Plus/Minus Query 1 TCGACCCTGATTTTAAACACGGTCTGGGCATATTTGCGCCCAATCCCACTTTATAGTGCT 60 ||||||| || || || |||| || ||||||| || ||||||| | | || Sbjct 11281 TCGACCCAGAAGTTGCCCAAAGTCTTGGTGGATTTGCGACCGATCCCACGGCACAACGCG 11222 Query 61 TACCATCACGGACAGGACTGTCGCGTTGTTGACGAAGTTCTGCTCCGTGAGGACGGCCAT 120 |||| |||| ||| | || ||| |||||||||||||| | |||||| || |||| Sbjct 11221 -ACCAGTACGGCGAGGCCGGTGGCGGCACTGACGAAGTTCTGCACGGTGAGGCCGACCAT 11163 Query 121 CTGACTTAGATAATTTAAGGACGCCTCACCGCTGTTGTTCTGCCAGTTGGTATTGGTCAT 180 |||||| || || | | |||||| |||||||||| ||||||||||||||| |||||||| Sbjct 11162 CTGACTGAGGTAGCTCAGGGACGCTTCACCGCTGTAGTTCTGCCAGTTGGTGTTGGTCAT 11103 Query 181 GAAACTGACGGCGGTATTAAACGCCTAGGTCCATTCCTGGCCCGGCAGGTTTTGCGGGTT 240 |||||||| |||||| || |||||| |||||||||||| ||||||| || |||||||| Sbjct 11102 GAAACTGATGGCGGTGTTGAACGCCAGGGTCCATTCCTGACCCGGCAATTTCTGCGGGTT 11043 Query 241 CAGCGGGAGGGAGCCTTGAAATAACAGAATAGAGAACAGCAGCAGGAAGCCGGCGAGGTT 300 |||||| ||| | | || || | ||| || | ||||||||||| ||| ||||| ||||| Sbjct 11042 CAGCGGCAGGTATTCCTGGAACAGCAGGATCGCGAACAGCAGCACGAAACCGGCAAGGTT 10983 Query 301 GAATGCGAGCAAGGCCAGCATGTACTTCTGCCAGCTTTGTTCCTGCTGTGCGTCCACACC 360 ||| || ||||| |||||| ||| ||||||||||| |||||||| | || || ||||| Sbjct 10982 GAACGCCAGCAACGCCAGCGCGTATTTCTGCCAGCTCTGTTCCTGGTCCGCATCGACACC 10923 Query 361 CGACAGGCGATAACAGGCGCTTTCCACCGGCCCCAGCACCGGGCTGAGCCAGGTGCGCTG 420 ||| |||||||| || ||| || ||||| || | |||||| |||||||||| ||||| Sbjct 10922 CGAAAGGCGATAGCACACGCGCTCGACCGGGCCGAACACCGGCGTGAGCCAGGTTCGCTG 10863 Query 421 GCCCTCCATCACCTTGTAGTAGAACCGCCCCAGGAACGGAGTCGGCACCAGTACCACGGC 480 || ||||| |||||||||||||||||||||||| ||| | ||| | ||| |||| ||| Sbjct 10862 CCCTTCCATTACCTTGTAGTAGAACCGCCCCAGGGCCGGTGCCGGAATCAGCACCAAGGC 10803 Query 481 AAAGAAGGCGATGATCAGCCAATAGTCATAACTGTGCATAGCC-GCTCCTAGTTCCGATC 539 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 10802 AAAGAAGGCGATGATCAGCCAATAGTCATAACTGTGCATAGCCTGCTCCTAGTTCCGATC 10743 Query 540 CGCGCGTAACAGCGCAACCAGC 561 |||||||||||||||||||||| Sbjct 10742 CGCGCGTAACAGCGCAACCAGC 10721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1692625184544