Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001416.1 Length=341 Score E Sequences producing significant alignments: (Bits) Value seq411 533 3e-149 seq59 179 7e-43 >seq411 Length=42130 Score = 533 bits (590), Expect = 3e-149 Identities = 323/340 (95%), Gaps = 1/340 (0%) Strand=Plus/Minus Query 1 CGACTTGAGCTTGCTCGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGAT 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 10681 CGACTTGAGCTTGCTGGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGAT 10622 Query 61 GGTGGCGACAAACGCCACGGCAATGCCGCTGCCCAGTTGCGAAGGGTCGGCGAGGTTGCC 120 ||||||||| |||||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct 10621 GGTGGCGACGAACGCCACGGCAATCCCGCTGCCCAGTTGCGACGGATCGGCCAGGTTGCC 10562 Query 121 CATCACGTGGATCAGGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCC 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10561 CATCACGTGGATCAAGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCC 10502 Query 181 CATGCTTTCAAAGACTTTGGCGGCGTTGATATCGCGGCTTTCCTGGGTGGTAGAAATCCA 240 ||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |||| Sbjct 10501 CATGCTTTCAAAGACTTTGGCAGCGTTGATGTCGCGGCTTTCCTGGGT-GTAGAAGTCCA 10443 Query 241 CTTCCCGAAGTCTGCGAATCGCTTCCGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCTT 300 |||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10442 CTTCGAGGATGCTGCGAATCGCTTCCGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCTT 10383 Query 301 TGCGCGCGTAGCTGTCGGGCTCGGCATCGGCCACGCCTTC 340 |||| ||||||||||||||||||||||||||||||||||| Sbjct 10382 TGCGGGCGTAGCTGTCGGGCTCGGCATCGGCCACGCCTTC 10343 >seq59 Length=142688 Score = 179 bits (198), Expect = 7e-43 Identities = 224/303 (74%), Gaps = 3/303 (1%) Strand=Plus/Plus Query 4 CTTGAGCTTGCTCGCCACCGGCAACAACACCAGGTTGGCACTGGCCACGCCGTAGATGGT 63 ||| |||||| || |||||||| |||| ||||||||| ||| | |||||||||||| Sbjct 27732 CTTCAGCTTGGCCGACACCGGCAGGAACAGCAGGTTGGCCGAGGCGATGCCGTAGATGGT 27791 Query 64 GGCGACAAACGCCACGGCAATGCCGCTGCCCAG-TTGCGAAGGGTCGGCGAGGTTGCCCA 122 |||| |||||| |||| |||||| ||| || |||| |||||||| ||||| || Sbjct 27792 GGCGGTGAACGCCGCGGCGATGCCGTGGCCGAGCTTGC-TCGGGTCGGCCAGGTTCTTCA 27850 Query 123 TCACGTGGATCAGGCCCATCACCGCACCGATGATGCCGATGGTCGGCGCGTAGCCGCCCA 182 |||| ||||||||||| |||||| ||||||||||| | || || |||||| ||||| Sbjct 27851 TCACCGCGATCAGGCCCAGCACCGCGCCGATGATGCCCAGCGTGGGGGCGTAGATGCCCA 27910 Query 183 TGCTTTCAAAGACTTTGGCGGCGTTGATATCGCGGCTTTCCTGGGTGGTAGAAATCCACT 242 ||| || || || |||| ||| | || || |||||| || | | || | | Sbjct 27911 TGCCCTCGAATACCTTGGACGCGGCCAGGTCCTGGTGCTCCTGGCTGCT-CAGTTCGATT 27969 Query 243 TCCCGAAGTCTGCGAATCGCTTCCGGCTCGGCGCCGTCCACCAGCAGTTGCAGGCCTTTG 302 ||| | ||| || | ||||||||| |||||||||||||||| |||||||| ||| Sbjct 27970 TCCATCATGTGGCGGATGGTTTCCGGCTCCACGCCGTCCACCAGCAGCTGCAGGCCCTTG 28029 Query 303 CGC 305 ||| Sbjct 28030 CGC 28032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988697886624