Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001436.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq284 280 2e-73 seq105 80.6 3e-13 >seq284 Length=207326 Score = 280 bits (310), Expect = 2e-73 Identities = 181/198 (91%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 1 CGACCTTTTTGCTCGCCTTCAAGCGCCGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 60 |||| || ||||| ||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 78799 CGACTTTCTTGCTGGCCTTCAGGCGACGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 78858 Query 61 CCAGGCCCAGTTCCGGATGCTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAG 120 ||||||||| ||| || || ||||||||||||||||||||||| ||||||||||| || | Sbjct 78859 CCAGGCCCAATTCAGGGTGTTCGTTGAGCCACAGGCTGAAGGCATCCTTGACCACCCCGG 78918 Query 121 AGACAAACGCCGCTGCCTCGCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCG 180 |||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 78919 AGACGAACGCCGCTGCCTCACGGGACGACAGGCGCTCCTTGGTCTGGCCGGAGAATTGCG 78978 Query 181 GTTCCTGCATCTTCATCG 198 | |||||||| ||||||| Sbjct 78979 GCTCCTGCATTTTCATCG 78996 >seq105 Length=265611 Score = 80.6 bits (88), Expect = 3e-13 Identities = 127/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 17 CTTCAAGCGCCGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGGCCAGGCCCAGTTCCGG 76 ||||| |||| | |||| | ||| ||||||| || | | ||||| ||| Sbjct 101425 CTTCAGGCGCGCACTGGCGCGCTCGATGGCCAGCTGGGCGATCTTCTCGCCCATCTCCAC 101484 Query 77 ATGCTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAGAGACAAACGCCGCTGC 136 | || ||| ||| ||||||||||||||| | | | || |||||| | || || Sbjct 101485 GTTCTGGTTCAGCAGCAGGCTGAAGGCGTCGTGCGCGGCACCCTCCACAAACCCGGCGGC 101544 Query 137 CTCGCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCGGTTCCTGCATCTTCAT 196 || ||| || |||||||||||||||||||| ||| ||| ||||| || |||||||| Sbjct 101545 CTGGCGCGAGGACAGGCGCTCCTTGGTCTGGCCGCTGAACTGCGGGTCGGTCATCTTCAG 101604 Query 197 CG 198 || Sbjct 101605 CG 101606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534346537121