Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001445.1 Length=285 Score E Sequences producing significant alignments: (Bits) Value seq1041 309 5e-82 >seq1041 Length=92228 Score = 309 bits (342), Expect = 5e-82 Identities = 236/283 (83%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 3 AGCTGGTGGGCTCGCGCGCCCTCGGCCCGCGTGATCGGCTGGTGCTGGTGCAGGTGGGCG 62 |||||||||| || |||||||| |||||||| || ||||||||||||||||||| |||| Sbjct 3257 AGCTGGTGGGTTCACGCGCCCTTGGCCCGCGGGACAGGCTGGTGCTGGTGCAGGTCGGCG 3198 Query 63 AGGAGCAGATCCTGCTCGGCATCACCCCCGGCCGCATCACCCCGCTGCATGTACTCAAGA 122 | |||||||||||||| |||||||||||||| |||||||||||| |||| || |||||| Sbjct 3197 ACGAGCAGATCCTGCTGGGCATCACCCCCGGTCGCATCACCCCGTTGCACGTGCTCAAGT 3138 Query 123 CCCCGGTGGACGCGGTCAAGACCGAAGCCGCCACGCNNNNNNNNNNNNAGCGCCTGATGG 182 | || ||||| | || | ||||| |||| ||||||| ||||||| |||| Sbjct 3137 CGCCTGTGGAAGTGGCCCAGACCCAAGCGGCCACGCCGGAATTCGCCCAGCGCCTCATGG 3078 Query 183 AGTTGCTGGGCAAGGATCAAAAGGATAAGAAGTAATGCGCGTTTTGTTGACGCTCATGCT 242 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 3077 AGTTGCTGGGCAAGGATCAGAAGGATAAGAAGTAATGCGCGTTTTATTGACGCTCATGCT 3018 Query 243 GTTGCTGGCCGCACCGATGGCCCTGGGCGCCGACCCGTTGTCG 285 ||||||||| || ||| |||| | || |||||||||||| Sbjct 3017 GTTGCTGGCAGCGCCGCTGGCGTACGCAGCAGACCCGTTGTCG 2975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 812718685202