Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001590.1 Length=402 Score E Sequences producing significant alignments: (Bits) Value seq1472 271 2e-70 seq796 228 2e-57 seq795 161 2e-37 >seq1472 Length=1669 Score = 271 bits (300), Expect = 2e-70 Identities = 274/355 (77%), Gaps = 6/355 (2%) Strand=Plus/Minus Query 1 CGAGGACATCTACAGCCGAAAGGCCGTGGGCTGGGAAGTTTACGAGCAAGAAAGTGGCGA 60 |||||| || |||||||| ||||||||||||||||| || ||||| ||||| || || Sbjct 603 CGAGGATATTTACAGCCGCAAGGCCGTGGGCTGGGAGGTCTACGACGCGGAAAGCGGTGA 544 Query 61 GCTGGCGGCCGAACTGATGCAGCGCACCGTGCTCACCGAACGCTGCGC---CGGACGGCC 117 || |||| ||| |||| |||| |||| || || | || || || || Sbjct 543 AAAAGCCGCCGCGCTGCTGCAACGCAGCGTGATCGGTGAGCAGTGTTTACACGAACCGC- 485 Query 118 CTTAGTGCTGCACTCGGACAACGGTGCACCGATGAAATCGGTGACGTTGCTGAGCAAACT 177 | |||||||||||||||||||| || |||||||||||||||||| |||||||||| | Sbjct 484 --TGGTGCTGCACTCGGACAACGGAGCGCCGATGAAATCGGTGACGCTGCTGAGCAAGAT 427 Query 178 GTACGAACTCGGCATCACCCCGTCACGCGGACGACCACGGGTGAGTAACGATAATCCCTA 237 |||||| || |||||||| || || || || ||||| || ||||| ||||| |||||||| Sbjct 426 GTACGACCTGGGCATCACGCCTTCGCGGGGCCGACCGCGTGTGAGCAACGACAATCCCTA 367 Query 238 CTCAGAATCGCTGTTTAGAACCCTGAAATATTGCCCGCAATGGCCTCCTGGTGGTTTTGC 297 ||| || |||||||||||||| |||||||| |||||||||||||| | | ||||||||| Sbjct 366 CTCGGAGTCGCTGTTTAGAACGCTGAAATACTGCCCGCAATGGCCGCTGGATGGTTTTGC 307 Query 298 AGATTTGGACGCGGCACGCAGCTGGGTGCGCGATTTTATCCGCTGGTACAACCAC 352 | |||| || || || |||||| | ||||||| || ||||||||| || Sbjct 306 CAGTCTGGATGCTGCTCGGGCTTGGGTGAGGAATTTTATGCGGTGGTACAACAAC 252 >seq796 Length=1674 Score = 228 bits (252), Expect = 2e-57 Identities = 262/350 (75%), Gaps = 2/350 (1%) Strand=Plus/Plus Query 1 CGAGGACATCTACAGCCGAAAGGCCGTGGGCTGGGAAGTTTACGAGCAAGAAAGTGGCGA 60 ||| || ||||||||||||||||| |||||||||||||||||||| ||||||||| || Sbjct 1134 CGAAGATATCTACAGCCGAAAGGCGGTGGGCTGGGAAGTTTACGACGTAGAAAGTGGTGA 1193 Query 61 GCTGGCGGCCGAACTGATGCAGCGCACCGTGCTCACCGAACGCTGCGCCGGACGGCCCTT 120 || || | | | |||| || | |||| | |||| ||| | | ||| | Sbjct 1194 AAAAGCAGCAGTATTACTGCAACGAAGCGTGACCCAGGAACAGTGCTGGCGCCAGCCGCT 1253 Query 121 AGTGCTGCACTCGGACAACGGTGCACCGATGAAATCGGTGACGTTGCTGAGCAAACTGTA 180 ||||||||||| |||||||| || |||||||| ||||||||| |||||| ||| |||| Sbjct 1254 GGTGCTGCACTCTGACAACGGCGCGCCGATGAAGTCGGTGACGCTGCTGACCAAGATGTA 1313 Query 181 CGAACTCGGCATCACCCCGTCACGCGGACGACCACGGGTGAGTAACGATAATCCCTACTC 240 ||| || |||||||| || || || || ||||| ||||| || || || || || || || Sbjct 1314 CGATCTGGGCATCACGCCATCTCGTGGTCGACCGCGGGTCAGCAATGACAACCCGTATTC 1373 Query 241 AGAATCGCTGTTTAGAACCCTGAAATATTGCCCGCAATGGCCTCCTGGTGGTTTT-GCAG 299 ||||| ||||| || || |||||||| |||||||| ||||| | | ||||||| |||| Sbjct 1374 GGAATCACTGTTCAGGACGCTGAAATACTGCCCGCAGTGGCCACTAGATGGTTTTAGCAG 1433 Query 300 ATTTGGACGCGGCACGCAGCTGGGTGCGCGATTTTATCCGCTGGTACAAC 349 |||| | || || |||||| | || ||||| |||||||||| Sbjct 1434 -CCTGGATGATGCGCGTGTTTGGGTGAGGGACTTTATGACCTGGTACAAC 1482 >seq795 Length=352 Score = 161 bits (178), Expect = 2e-37 Identities = 169/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 1 CGAGGACATCTACAGCCGAAAGGCCGTGGGCTGGGAAGTTTACGAGCAAGAAAGTGGCGA 60 ||| || ||||||||||||||||| |||||||||||||||||||| ||||||||| || Sbjct 129 CGAAGATATCTACAGCCGAAAGGCGGTGGGCTGGGAAGTTTACGACGCAGAAAGTGGTGA 188 Query 61 GCTGGCGGCCGAACTGATGCAGCGCACCGTGCTCACCGAACGCTGCGCCGGACGGCCCTT 120 || || | | | |||| || | |||| | |||| ||| | | ||| | Sbjct 189 AAAAGCAGCGGTATTACTGCAACGAAGCGTGACCCAGGAACAGTGCTGGCGCCAGCCTCT 248 Query 121 AGTGCTGCACTCGGACAACGGTGCACCGATGAAATCGGTGACGTTGCTGAGCAAACTGTA 180 ||| ||||||| |||||||| || |||||||| ||||||||| |||||| ||| |||| Sbjct 249 GGTGTTGCACTCTGACAACGGCGCGCCGATGAAGTCGGTGACGCTGCTGACCAAGATGTA 308 Query 181 CGAACTCGGCATCACCCCGTCACGCGGACGACCACGGGTGAG 222 ||| || |||||||| ||||| || || ||||| ||||| || Sbjct 309 CGATCTGGGCATCACGCCGTCGCGTGGTCGACCGCGGGTCAG 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1183877728320