Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq399 367 3e-99 seq90 152 1e-34 >seq399 Length=120904 Score = 367 bits (406), Expect = 3e-99 Identities = 242/268 (90%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 3 GACGAACTGGCGCCGCAGCATGTGAAAGTGCCGTCGGGCTCGTCGGTGCGCCTGGACTAC 62 ||||| ||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||| Sbjct 25240 GACGAGCTGGCGCCGCACCATCTGAAGGTGCCGTCGGGCTCGTCGGTGCGGCTGGACTAC 25181 Query 63 AGCGAACAGCCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACA 122 ||||| ||||||||||| |||||||||||| |||||||||||||||| |||||||| || Sbjct 25180 AGCGAGCAGCCGCCGATTCTGGCGGTGCGCTTGCAGGAATTGTTCGGGCTGGCGGATACG 25121 Query 123 CCGCGCATTGCCGGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGG 182 ||||| |||||||||||||| |||||||||||| |||||||| |||| ||| | | || Sbjct 25120 CCGCGGATTGCCGGCGGGCGGCAGGTGGTCAAGCTGCACCTGTTGTCACCGGCCAGACGG 25061 Query 183 CCGGTGCAGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAG 242 || ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 25060 CCCGTGCAGGTGACGCAGGACCTGGCGAACTTCTGGCGCAGTACTTACGCCGAGGTGAAG 25001 Query 243 AAGGATCTGAAGGGGCGGTATCCGAAGC 270 |||||| ||||||||||||||||||||| Sbjct 25000 AAGGATTTGAAGGGGCGGTATCCGAAGC 24973 Score = 75.2 bits (82), Expect = 2e-11 Identities = 70/89 (79%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 267 AAGCATTATTGGCCGGATGATCCGTTGGTGGCCGAAGCGACGGCGCGGATCAAACCCCGT 326 |||||||| |||||||||||||||||| | || ||| |||| || |||||||| || | Sbjct 16000 AAGCATTACTGGCCGGATGATCCGTTGATTGCTGAACCGACTGCCCGGATCAAGCCGAGA 15941 Query 327 AAGTAGCAACGACGGAGATCAACTGTGGG 355 ||||| || || ||||| | |||||| Sbjct 15940 AAGTAAGTACATCGCAGATCTAATGTGGG 15912 >seq90 Length=95466 Score = 152 bits (168), Expect = 1e-34 Identities = 166/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 75 CCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACACCGCGCATTGCC 134 ||| | ||||||||| |||||||| ||||||||||||| ||||| |||||||| ||| Sbjct 74443 CCGGTGCTGGCGGTGAAGCTGCAGGAGCTGTTCGGCCTGGCCGACACCCCGCGCATCGCC 74384 Query 135 GGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTC-CCCGTCGCGCAGGCCGGTGCAGGT 193 | || ||| | | ||| |||||||||| || |||| || || | || ||||||| Sbjct 74383 GATGGCCGCGTGCCGCTCACCCTGCACCTGCTCTCGCCCGGCG-GCCGCCCCCTGCAGGT 74325 Query 194 GACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAGAAGGATCTGAA 253 |||||||| ||| ||||||||| || |||||||||||||| || ||||| |||| Sbjct 74324 CACCCAGGACCTGCGCAACTTCTGGGCCAACACCTACGCCGAGGTCAAAAAGGAAATGAA 74265 Query 254 GGGGCGGTATCCGAAGCATTATTGGCCGGATGATCCGT 291 ||| || ||||| ||| |||||||| ||||||| Sbjct 74264 GGGCCGCTATCCCCGGCACCCGTGGCCGGACGATCCGT 74227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033493260128