Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001671.1 Length=306 Score E Sequences producing significant alignments: (Bits) Value seq1487 381 1e-103 seq77 89.7 9e-16 >seq1487 Length=28230 Score = 381 bits (422), Expect = 1e-103 Identities = 268/306 (88%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 1 CGAGGGTCTCAAGCGCGACCACCTGCTGGGCACCACCACCTGCGTCAAGGTGGAGCTCTA 60 |||||| || ||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 24537 CGAGGGACTGAAGCGCGACAACCTGCTGGGCGCCACCACCTGCGTCAAGGTGGAGCTCTA 24596 Query 61 TGGCTCGTTGGGCGCCACTGGCAAAGGCCACGGCAGCGACAAGGCCATGTTGCTGGGCCT 120 |||||| | |||||||| ||||||||||||||||| ||||||||| | ||||||||||| Sbjct 24597 TGGCTCACTCGGCGCCACCGGCAAAGGCCACGGCAGTGACAAGGCCGTATTGCTGGGCCT 24656 Query 121 GGAAGGCGAACACCCCGACACCGTGAATACCGAAACCGTGGCTGCCCGCCTGGCGCAGAT 180 ||||||||| ||||| ||||||||||| ||||||||||| || ||||||||| | | || Sbjct 24657 GGAAGGCGAGCACCCGGACACCGTGAACACCGAAACCGTTGCCGCCCGCCTGTTGGAAAT 24716 Query 181 GCGCAAGGACGGCCGCCTGAATTTGCTCGGTGAACACAGCATTGCGTTCAACGAGAAAGA 240 ||| ||| ||| |||| ||||||| ||||||||||||||||||||||||||||| Sbjct 24717 TCGCGGCAACGCACGCTTGAACCTGCTCGGCGAACACAGCATTGCGTTCAACGAGAAAGA 24776 Query 241 ACACCTGGCGATGATCCGCAAACCCCTCGCCTACCATCCCAACGGCATGATCTTTCGTGC 300 ||||||||||||||| ||||||||||| |||| |||||||||||||||||||| || || Sbjct 24777 ACACCTGGCGATGATTCGCAAACCCCTGCCCTATCATCCCAACGGCATGATCTTCCGCGC 24836 Query 301 TTTCGA 306 ||||| Sbjct 24837 CTTCGA 24842 >seq77 Length=324652 Score = 89.7 bits (98), Expect = 9e-16 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 53 GAGCTCTATGGCTCGTTGGGCGCCACTGGCAAAGGCCACGGCAGCGACAAGGCCATGTTG 112 ||||| || |||||| |||||||||| ||||| |||||||||| |||||||| | || || Sbjct 128712 GAGCTTTACGGCTCGCTGGGCGCCACCGGCAAGGGCCACGGCACCGACAAGGGCGTGCTG 128653 Query 113 CTGGGCCTGGAAGGCGAACACCCCGACACCGT 144 ||||||||| ||||| ||| ||||| || Sbjct 128652 CTGGGCCTGATGGGCGAGGCCCCTGACACGGT 128621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 876709452864