Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq1359 372 5e-101 seq83 113 8e-23 >seq1359 Length=12993 Score = 372 bits (412), Expect = 5e-101 Identities = 266/306 (87%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 1 CGAGCTGGATCACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGC 60 ||||||||| || || |||||||||||||||||||||||||||| || ||||||||||| Sbjct 5540 CGAGCTGGACAACGTGGTGGAAATCGCCGTTGAAGACGAAGAGATCGTGCAGCGTATTGC 5481 Query 61 TGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAA 120 || ||||| || || || |||||||||||||| ||||||| ||||||||| ||||| || Sbjct 5480 CGGTCGTCGTGTTCACGAGGCCTCGGGCCGCGTCTACCACATCGTCTACAACCCGCCGAA 5421 Query 121 GGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGA 180 || || |||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct 5420 AGTCGCGGGCAAGGACGATGTCACCGGCGAAGACCTGGTGCAGCGTAAGGACGACACCGA 5361 Query 181 AGAAACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTT 240 ||| ||||| ||||| |||||||| || |||||||| || |||||||||||||||||||| Sbjct 5360 AGAGACCGTGCGTCATCGCCTGTCGGTCTACCATTCCCAGACCAAGCCGCTGGTGGACTT 5301 Query 241 CTACCAGAAGCTGGCTGCTGCCCAGGGCAAGCCCAAGTACAGCCACGTTGAAGGCGTTGG 300 ||||||||| || | || |||||||||||||| |||||||||||| | ||||| || || Sbjct 5300 CTACCAGAAACTCTCGGCCGCCCAGGGCAAGCCGAAGTACAGCCACATCGAAGGTGTGGG 5241 Query 301 CTCGGT 306 ||||| Sbjct 5240 TTCGGT 5235 >seq83 Length=313169 Score = 113 bits (124), Expect = 8e-23 Identities = 170/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 3 AGCTGGATCACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGCTG 62 ||||||| || || ||||||||| || || ||||| || || | || || | Sbjct 126798 AGCTGGACTACGTGGTGGAAATCGAAGTCCCCGAAGAAGACATCATCGAACGCATGAGCG 126857 Query 63 GCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGG 122 | || ||||| || | || |||||| |||||| || ||| ||||| |||| Sbjct 126858 GACGCCGCGTGCACCAGCCCAGCGGCCGCAGCTACCACGTGCGCTTCAACCCGCCCAAGG 126917 Query 123 TTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAAG 182 | | |||||||||||| || ||||||||||||||| | |||||| | || ||| ||| | Sbjct 126918 TCGAAGGCAAGGACGACGTCACCGGCGAAGACCTGATCCAGCGCGACGATGACCGCGAGG 126977 Query 183 AAACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTTCT 242 | ||||| || |||||||| || |||| ||| ||| |||||||| |||| || Sbjct 126978 ACACCGTGCGCAACCGCCTGAACGTCTACCGCCAGCAGACCCGTCCGCTGGTCGACTACT 127037 Query 243 AC 244 || Sbjct 127038 AC 127039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899107139616