Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq1055 526 5e-147 seq155 187 6e-45 seq57 172 1e-40 >seq1055 Length=31167 Score = 526 bits (582), Expect = 5e-147 Identities = 353/394 (90%), Gaps = 0/394 (0%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||| || || | Sbjct 15087 CGATGGTCAGCAATTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGGCCTACCT 15146 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 | ||||||||||| ||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct 15147 GGTCCTGCTGCTCAGCCAGGCCGTAGCGGAATTTGCGCACGCCCAGGAAGTGTTCCAGCA 15206 Query 121 AGTCGGCCGTGACCTTCACCGAGAAGCGTTTTTCCAGCGCATGTTCCTTGACCGCCTTGC 180 ||| || ||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 15207 GGTCAGCGGTGACCTTCACCGAGAAGCGTTTTTCCAGCGCATGTTCCTTCACGGCCTTGC 15266 Query 181 GGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAGC 240 ||||||||||||| | || ||||| ||||| || |||||||| |||||||||||| | | Sbjct 15267 GGCAGATCTTCGCCAGTTGACGCTCAAGGCCCCGTACACCGGCCTCGCGGGTGTAGAAAC 15326 Query 241 GGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCATTGG 300 | | |||||||||||||| | || | ||||||||||||||||| || |||||||| |||| Sbjct 15327 GAATGATGTCGCGGATCGCGTCGGCATCAAATTCGATCTCGCCTTTTTTCAGGCCGTTGG 15386 Query 301 CCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGT 360 ||| |||||||||||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct 15387 CCGCAATCTGCTTGGGCGAGAGGTATTTGACGGCGATGTTGATCTTCTCGTCTTCGGTGT 15446 Query 361 AACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||||||| |||||||| |||||||||||||| Sbjct 15447 AACCCGGCAGACGAATCACCTCCATCCGGTCCAG 15480 >seq155 Length=27654 Score = 187 bits (206), Expect = 6e-45 Identities = 186/241 (77%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 154 CCAGCGCATGTTCCTTGACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCAC 213 ||||||| |||||||||| |||||||||||||||| || | | |||||| ||| | Sbjct 2140 CCAGCGCGATTTCCTTGACCACCTTGCGGCAGATCTTGGCCACTTCGCGCTCGAGGTTGC 2199 Query 214 GCACACCGGCTTCGCGGGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATT 273 ||||||| | |||||| ||||||||||| |||||||| |||| | | || | || | | Sbjct 2200 GCACACCCGATTCGCGCGTGTAGTAGCGCACGATGTCCTGGATGGCGTCGGCCTCGATCT 2259 Query 274 CGATCTCGCCCTTCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGG 333 | | || || |||||| ||||||||| | |||||||||| | ||||| |||| Sbjct 2260 CCAGTTCCTCCGGCTTCAGCCCATTGGCCTTGAGCTGCTTGGGCACCAGGTAGCGCATGG 2319 Query 334 CGATGTTGATCTTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCA 393 ||||||||| ||| || || |||||||| || || | ||| ||||||||||| ||||||| Sbjct 2320 CGATGTTGAGCTTTTCATCCTCGGTGTAGCCGGGGATGCGGATCACTTCCATGCGGTCCA 2379 Query 394 G 394 | Sbjct 2380 G 2380 >seq57 Length=417080 Score = 172 bits (190), Expect = 1e-40 Identities = 294/428 (69%), Gaps = 35/428 (8%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 |||| || |||| ||||| || || | ||||| |||||||| || || ||||||| | Sbjct 372683 CGATCGTGAGCAGATCGCCACCGACTTCCGTCCAGGCCAGGCCGGTCACTTGACCGATCT 372742 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGT-GCTCCAGG 119 | | | || ||||||| |||| || || | ||||||||||||| ||| ||| ||| Sbjct 372743 GGTTTTCCTTTTCGGCCATGCCGAAGGTGTAGCGGCGCACGCCGAGGTAGTCGCTG-AGG 372801 Query 120 GAGTCGGCCGTGACCTTCACCGA---GA-----AGCGTTTTTCCAGCG-------CATGT 164 |||| ||||||| || |||| || || || || || || || | Sbjct 372802 TTGTCGCCCGTGACATTGACCGGCTTGACCTCGAGGGTCTTGCCTTCGGCCTTGGCACGA 372861 Query 165 TC------------------CTTGACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCC 206 || ||||| |||||||||||||||| | | | ||| || Sbjct 372862 TCGGTCTGGGTCAGCAATTGCTTGATGACCTTGCGGCAGATCTTGCCCACTTCGCGTTCG 372921 Query 207 AGGCCACGCACACCGGCTTCGCGGGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACT 266 || ||||||||||||||||||||||||||||||| ||||||||||| | | || | | Sbjct 372922 AGCGCACGCACACCGGCTTCGCGGGTGTAGTAGCGCACGATGTCGCGCAAGGCGCTGTCA 372981 Query 267 TCAAATTCGATCTCGCCCTTCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTAC 326 || | | |||| | ||||| ||| ||| | ||| |||||||| || | Sbjct 372982 TCGACGGTCAGCTCGGTATCCTTCACGCCGTTGTTCTTCATCAGCTTGGGCAGCAGATGG 373041 Query 327 TTGATGGCGATGTTGATCTTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATC 386 | | |||||||| |||||| || || ||||||||||||| |||||| ||||||||||| Sbjct 373042 TCGCGGGCGATGTGGATCTTTTCTTCCTCGGTGTAACCCGACAGGCGGATCACTTCCATG 373101 Query 387 CGGTCCAG 394 |||||||| Sbjct 373102 CGGTCCAG 373109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158280372032