Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001702.1 Length=226 Score E Sequences producing significant alignments: (Bits) Value seq878 313 3e-83 seq170 80.6 3e-13 >seq878 Length=51136 Score = 313 bits (346), Expect = 3e-83 Identities = 205/226 (91%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 1 CGACGATGAAACGGAAAATCCCGTAGAACAACGCGAACATGCCCGACACGGCCATGGTTG 60 ||||||| || ||||| ||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 39857 CGACGATAAAGCGGAAGATCCCGTAGAACAACGCGAACATCCCCGAAACGGCCATGGTTG 39916 Query 61 GGCGTGGCTTGCGCGAGAAGATGTAGAGGATAAGGAACAGCGCCACACCTTCCAACGCAA 120 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| || | Sbjct 39917 GGCGTGGCTTGCGCGAGAAGATGTAGAGGATCAGGAACAGCGCCACGCCTTCCAGGGCGA 39976 Query 121 ACTGGTAGAGCTGCGACGGATGGCGCGGCAGTTGTGCCGGGTCGCTGAACGGGGGGAACA 180 ||||||| |||||||| || |||||||||| ||| ||||||||||||||||| ||||||| Sbjct 39977 ACTGGTACAGCTGCGAGGGGTGGCGCGGCAATTGCGCCGGGTCGCTGAACGGCGGGAACA 40036 Query 181 CCATCGCCCACGGCACATCGGTCGGCTTGCCCCACAACTCGGCGTT 226 |||| ||||||||||| || |||||||||||||||| |||||||| Sbjct 40037 CCATGGCCCACGGCACGTCAGTCGGCTTGCCCCACAGTTCGGCGTT 40082 >seq170 Length=203534 Score = 80.6 bits (88), Expect = 3e-13 Identities = 99/133 (74%), Gaps = 8/133 (6%) Strand=Plus/Minus Query 95 GAACAGCGCCACACCTTCCAACGCAAACTGGTAGAGCTGCGACGGATGGCGCGGCAGTTG 154 ||||||| | | ||||||| | | || ||||| ||||||||||||||||||| Sbjct 5731 GAACAGCACGATGCCTTCCAGGCCCAGCTCATAGAGTTGCGACGGATGGCGCGGCAC--- 5675 Query 155 TGCCGG-GTCGCTGAACGGGGGGAACACCATCGCCCACGGCACATCGGTCGGCTTGCCCC 213 |||| | ||||| |||| |||||||||||||| ||||| ||||| || ||||| Sbjct 5674 -GCCGTCGCCGCTGCTCGGG---AACACCATCGCCCATGGCACGTCGGTGGGGCGGCCCC 5619 Query 214 ACAACTCGGCGTT 226 ||| ||| |||| Sbjct 5618 ACAGTTCGCCGTT 5606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 623937573285