Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001766.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq1498 86.0 7e-15 seq104 86.0 7e-15 seq1089 84.2 2e-14 seq554 84.2 2e-14 seq866 80.6 3e-13 seq1274 78.8 1e-12 seq1107 75.2 1e-11 seq1087 75.2 1e-11 seq284 75.2 1e-11 seq1452 73.4 4e-11 seq399 73.4 4e-11 >seq1498 Length=5849 Score = 86.0 bits (94), Expect = 7e-15 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 ||||||||| |||||||| |||||||| ||||| ||| |||||||||||||||||||| Sbjct 2376 GATGGCATCACCTCGGTGCGACTGATACACCGAGTTGCCTGCATCGCAGGCAAGCCAGCT 2317 Query 80 CCCAC 84 ||||| Sbjct 2316 CCCAC 2312 >seq104 Length=29226 Score = 86.0 bits (94), Expect = 7e-15 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAG-C 78 ||| ||||| ||||||| | |||| |||||||| |||| ||||||| |||||||| | | Sbjct 25497 GATTGCATCACCTCGGTGTAACTGACACATCGAGGCGCCTGCATCGCGGGCAAGCCCGGC 25438 Query 79 TCCCACACAAGCCAGTGCCCAC 100 ||||||||||||||| ||||| Sbjct 25437 TCCCACACAAGCCAGCTCCCAC 25416 >seq1089 Length=39242 Score = 84.2 bits (92), Expect = 2e-14 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 ||| ||||| ||||||| | |||||||| |||| ||| |||||||||||||||||||| Sbjct 15741 GATAGCATCACCTCGGTGTAACTGATACACCGAGGTGCCGGCATCGCAGGCAAGCCAGCT 15682 Query 80 CCCACACAAGC 90 |||||| |||| Sbjct 15681 CCCACAGAAGC 15671 >seq554 Length=80997 Score = 84.2 bits (92), Expect = 2e-14 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 ||||||||| || |||| | |||||||| ||||| | |||||||||||||||||||||| Sbjct 15759 GATGGCATCACCTTGGTGTACCTGATACACCGAGTTGTCCGCATCGCAGGCAAGCCAGCT 15700 Query 80 CCCACA 85 |||||| Sbjct 15699 CCCACA 15694 >seq866 Length=49628 Score = 80.6 bits (88), Expect = 3e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 |||||||||| ||||||| | |||||| || | || ||||||||||||||||||||| Sbjct 23986 GATGGCATCGCCTCGGTGTGGCAGATACACCGCGGGGCGCGCATCGCAGGCAAGCCAGCT 23927 Query 80 CCCACACAA 88 ||||||||| Sbjct 23926 CCCACACAA 23918 >seq1274 Length=35339 Score = 78.8 bits (86), Expect = 1e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 |||||||||| |||||| | |||||| |||||| || |||||||||||||||||||| Sbjct 12584 GATGGCATCGCCTCGGTCTCGCAGATACACCGAGTCACCTGCATCGCAGGCAAGCCAGCT 12643 Query 80 CCCACA 85 |||||| Sbjct 12644 CCCACA 12649 >seq1107 Length=37907 Score = 75.2 bits (82), Expect = 1e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 ||| ||||| | ||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct 22495 GATAGCATCACCGAGGTGCATCTGACACACCGAGGTGCCCGCATCGCAGGCAAGCCAGCG 22436 Query 80 CCCACA 85 |||||| Sbjct 22435 CCCACA 22430 >seq1087 Length=39966 Score = 75.2 bits (82), Expect = 1e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 ||||||||| ||||||||| | |||||| |||| ||| ||||||||||||||||||| Sbjct 3481 GATGGCATCAACTCGGTGCGACAGATACACCGAGGTGCCTGCATCGCAGGCAAGCCAGCG 3540 Query 80 CCCACA 85 || ||| Sbjct 3541 CCTACA 3546 >seq284 Length=207326 Score = 75.2 bits (82), Expect = 1e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 ||||||||| |||||||| |||||||| || || | |||||||||||||||||||| Sbjct 203917 GATGGCATCAACTCGGTGTGCCTGATACACCGTAGCGTCTGCATCGCAGGCAAGCCAGCT 203976 Query 80 CCCACA 85 |||||| Sbjct 203977 CCCACA 203982 >seq1452 Length=26095 Score = 73.4 bits (80), Expect = 4e-11 Identities = 55/65 (85%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 |||||||||||||| | | |||| | | ||||||| | |||||||||||||||||||| Sbjct 20273 GATGGCATCGACTCAATACCACTGACAGACCGAGTCGACTGCATCGCAGGCAAGCCAGCT 20332 Query 80 CCCAC 84 ||||| Sbjct 20333 CCCAC 20337 >seq399 Length=120904 Score = 73.4 bits (80), Expect = 4e-11 Identities = 66/82 (80%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAG-C 78 ||||||||| |||||| || |||| | |||| ||| ||||||| |||||||| | | Sbjct 15896 GATGGCATCACCTCGGTCTGTCGGATAGACCGAGGTGCCTGCATCGCGGGCAAGCCCGGC 15837 Query 79 TCCCACACAAGCCAGTGCCCAC 100 ||||||||||||||| ||||| Sbjct 15836 TCCCACACAAGCCAGCTCCCAC 15815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537546216984