Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001951.1 Length=416 Score E Sequences producing significant alignments: (Bits) Value seq351 556 3e-156 seq514 183 7e-44 seq463 105 2e-20 >seq351 Length=183164 Score = 556 bits (616), Expect = 3e-156 Identities = 373/416 (90%), Gaps = 0/416 (0%) Strand=Plus/Plus Query 1 TCCATCCCAACGCCATGACCCAGGTGGTGTTTGGCGAAAACGGCGAGCTGCACCGCGACA 60 |||| || || |||||||||| ||||||||| || || |||||||||||||||||||||| Sbjct 30645 TCCACCCTAATGCCATGACCCTGGTGGTGTTCGGTGATAACGGCGAGCTGCACCGCGACA 30704 Query 61 CCTATTACTCGGTGGGTGGCGGTTTCGTGGTGGATGAAGCCCAGGCCCAAAGCGGTGTGG 120 |||| ||||||||||| ||||| |||||||||||||||||||||||| | ||||| |||| Sbjct 30705 CCTACTACTCGGTGGGCGGCGGATTCGTGGTGGATGAAGCCCAGGCCAACAGCGGCGTGG 30764 Query 121 CGGACATGGACCGTACCGAGCTGCCCTATGATTTTTCCAGTGCCGTGGAGCTGTTGCAGC 180 ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||| Sbjct 30765 CGGACATGGACCGCACCGAGCTGCCCTATGATTTTTCCAGTGCGGTGGAACTGCTGCAGC 30824 Query 181 TGTGCAAGACCCACAACCTGCGCGTTGCCGAACTGATGCTGGCGAATGAAAAAACCTGGC 240 ||||||||||||||||||||||||| || || |||||| ||||||||||||||||||||| Sbjct 30825 TGTGCAAGACCCACAACCTGCGCGTCGCTGAGCTGATGTTGGCGAATGAAAAAACCTGGC 30884 Query 241 GCAGCGAAGAAGAAATCCGCAGCGGCCTGATGAAACTCTGGCGCGCCATGCAGGATTGCG 300 || ||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 30885 GCTCGGAAGAAGAAATCCGCAGCGGCCTGATGAAGCTTTGGCGCGCCATGCAGGATTGCG 30944 Query 301 TGGAGCAGGGCCTCAAGCACGAAGGTATCCTGCCCGGCGGCTTGAACGTGCGCCGTCGCG 360 ||||||| ||||| ||||||||||| ||||| ||||||||| | || || || || || | Sbjct 30945 TGGAGCAAGGCCTAAAGCACGAAGGCATCCTTCCCGGCGGCCTTAATGTACGGCGCCGTG 31004 Query 361 CTGCCAAGTTACACCGCAGCTTGCAGGAGCTGAACAAGCCCAATGTGATCGGCTCG 416 | |||||||| ||||||||||||||||||||| |||||| || |||||||||||| Sbjct 31005 CAGCCAAGTTGCACCGCAGCTTGCAGGAGCTGGGCAAGCCGAACGTGATCGGCTCG 31060 >seq514 Length=41058 Score = 183 bits (202), Expect = 7e-44 Identities = 294/418 (70%), Gaps = 6/418 (1%) Strand=Plus/Minus Query 2 CCATCCCAACGCCATGACCCAGGTGGTGTTTGGCGAAAACGGCGAGCTGCACCGCG-ACA 60 ||| |||||||||||| ||| | | | |||||||||||| | || | || | | | Sbjct 22306 CCACCCCAACGCCATGTCCCTGCATGCCTACGGCGAAAACGGCCCGTTG-AGCGAGCAAA 22248 Query 61 CCTATTACTCGGTGGGTGGCGGTTTCGTGGTGGATGAAGCCCAGGCCCAAAGCGGTGTGG 120 | || ||||||||||| ||||||||| | | || | || | ||| | |||| | | Sbjct 22247 CGTACTACTCGGTGGGCGGCGGTTTCATCATCGAAGCGGCAGAAGCCGAGTCCGGTATCG 22188 Query 121 CG--GACATGGACCGTACCGAGCTGCCCTATGATTTTTCCAGTGCCGTGGAGCTGTTGCA 178 || ||| | || | | ||||||| || ||||| || ||||| || ||| || Sbjct 22187 CGCCGACCAGCGAAGTGC--AATTGCCCTACGACTTTTCGAGCGCCGTCGAACTGCTGGC 22130 Query 179 GCTGTGCAAGACCCACAACCTGCGCGTTGCCGAACTGATGCTGGCGAATGAAAAAACCTG 238 ||||||| | ||| |||||| ||| |||| |||||| |||| || || |||| Sbjct 22129 CTTGTGCAACAAGCACGGCCTGCGGGTTTCCGAGCTGATGATGGCCAACGAGCGGGCCTG 22070 Query 239 GCGCAGCGAAGAAGAAATCCGCAGCGGCCTGATGAAACTCTGGCGCGCCATGCAGGATTG 298 ||||||||| | || ||||||||||||||| || | ||||| | |||| || || Sbjct 22069 GCGCAGCGATGCCGAGATCCGCAGCGGCCTGCTGCATATCTGGTCGGTGATGCGTGAATG 22010 Query 299 CGTGGAGCAGGGCCTCAAGCACGAAGGTATCCTGCCCGGCGGCTTGAACGTGCGCCGTCG 358 ||| || || ||||| |||||||| |||||||||||||| || | |||| || || Sbjct 22009 CGTCGAACAAGGCCTGCGCCACGAAGGCATCCTGCCCGGCGGTCTGGATGTGCCACGGCG 21950 Query 359 CGCTGCCAAGTTACACCGCAGCTTGCAGGAGCTGAACAAGCCCAATGTGATCGGCTCG 416 ||| || || || ||||||||| ||| ||| | ||| ||||| || ||| |||| Sbjct 21949 CGCGGCGAAATTGCACCGCAGCCTGCTGGAAATCGGCAAACCCAACGTTATCACCTCG 21892 >seq463 Length=128983 Score = 105 bits (116), Expect = 2e-20 Identities = 124/165 (75%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 198 CTGCGCGTTGCCGAACTGATGCTGGCGAATGAAAAAACCTGGCGCAGCGAAGAAGAAATC 257 ||| || ||||| | ||||| | | ||| ||||| ||||||||||||||| |||||| Sbjct 9724 CTGAGCATTGCCCAGATGATGTTCGAGAACGAAAAGTGCTGGCGCAGCGAAGACGAAATC 9665 Query 258 CGC-AGCGGCCTGATGAAACTCTGGCGCGCCATGCAGGATTGCGTGGAGCAGGGCCTCAA 316 ||| ||| || || | ||||| |||| ||||||| ||||||| | ||| || Sbjct 9664 CGCGAGCAGCTGCGCGAGA-TCTGGAGCGCGATGCAGGCCTGCGTGGCCCGTGGCATCCG 9606 Query 317 GCACGAAGGTATCCTGCCCGGCGGCTTGAACGTGCGCCGTCGCGC 361 || ||||| | ||||||||||||| || ||||| ||||||||| Sbjct 9605 CCAGGAAGGCACCCTGCCCGGCGGCCTGCACGTGTCCCGTCGCGC 9561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1228673101824