Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01001989.1 Length=469 Score E Sequences producing significant alignments: (Bits) Value seq778 630 2e-178 seq55 84.2 6e-14 >seq778 Length=29416 Score = 630 bits (698), Expect = 2e-178 Identities = 421/469 (90%), Gaps = 0/469 (0%) Strand=Plus/Plus Query 1 CGAGCCCAGCGGCGGCAACACCGGCATTGGCCTGGTGATGGCGGGCAACGTGCTGGGCTA 60 |||||||||||| |||||||||||||| |||||||||||||| || |||||||||||||| Sbjct 23581 CGAGCCCAGCGGTGGCAACACCGGCATCGGCCTGGTGATGGCCGGTAACGTGCTGGGCTA 23640 Query 61 CAAAGTGGTGCTGGTGATCCCCGACAACTACAGCCCCGAAAAGCAGAAGCTGCTGCGCCT 120 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 23641 CAAAGTGGTGCTGGTGATCCCCGACAACTACAGCCCCGAGAAGCAGAAACTGCTGCGCCT 23700 Query 121 CTACGGCGCCAAGGTGGTGCTGTCAGACAGCCGCCTCGGTAACAATTCCTACGGCGAAAA 180 |||||||||| |||||||||||| ||||||||||| || ||||||||| |||||||||| Sbjct 23701 GTACGGCGCCAGGGTGGTGCTGTCTGACAGCCGCCTGGGCAACAATTCCCACGGCGAAAA 23760 Query 181 GTGCCTGGAACTGCAACTGGAAAACCCCAGCTACGTGATGCTCAACCAGCAACGCAATGG 240 |||| |||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| || Sbjct 23761 GTGCATGGAGCTGCAGCTGGAAAACCCCAGCTACGTGATGCTCAATCAGCAGCGCAACGG 23820 Query 241 CGCCAACCCGCAAACCCACCGCGACACCACCGCACCCGAGATCCTGCGCGCTTTTGGTGA 300 |||||||||||| |||||||| ||||||||||| | || ||| | ||||| || || || Sbjct 23821 CGCCAACCCGCAGACCCACCGTGACACCACCGCCCGGGAAATCATCCGCGCCTTCGGCGA 23880 Query 301 GCGGCGCGTGGACTACTTCGTCAGCGGCATCGGCACCGGTGGCCACATCACCGGCATCGG 360 || ||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 23881 GCTGCGTGTGGACTACTTCGTCAGCGGCATCGGCACCGGGGGCCATATCACCGGCATCGG 23940 Query 361 CGAAACCCTCAAGGCCGCCTGGCCGGAGCTGCGCGTCATGGGCGTGGAGCCGGAAGAGTG 420 ||||||||||||| | ||||||||| | | ||||| ||||| ||||||||||||||||| Sbjct 23941 CGAAACCCTCAAGAGCACCTGGCCGGCGATCCGCGTGATGGGGGTGGAGCCGGAAGAGTG 24000 Query 421 CGACCTGCTGAAAAACCAGCACGCGCCGCACCATATCCAGGGCCTGTCG 469 ||||||||| | ||| || ||||||||||||||||||||||||||| Sbjct 24001 CGACCTGCTCAGCGACCGCCATGCGCCGCACCATATCCAGGGCCTGTCG 24049 >seq55 Length=127961 Score = 84.2 bits (92), Expect = 6e-14 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 242 GCCAACCCGCAAACCCACCGCGACACCACCGCACCCGAGATCCTGCGCGCTTTTGGTGAG 301 ||||||||| ||||||| |||||||||| || || |||||||||| || | | Sbjct 3160 GCCAACCCGGCCTACCACCGCAACACCACCGCGCCGGAAATCCTGCGCGACTTCGCCGGC 3101 Query 302 CGGCGCGTGGACTACTTCGTCAGCGGCATCGGCACCGGTGGCCACATCACCGGCATCGGC 361 |||| ||||||||||||| | |||| |||||||| ||| | | |||||| | ||| Sbjct 3100 AAGCGCCTGGACTACTTCGTGACCGGCTGGGGCACCGGCGGCACCCTGACCGGCGTGGGC 3041 Query 362 GAAACCCTCAAGGCCGCCTGGCCGGA 387 || || |||| ||| | ||||| Sbjct 3040 GAGGTGCTGAAGGTGGCCCGCCCGGA 3015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1398255587232