Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01002002.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq613 246 3e-63 seq116 86.0 7e-15 >seq613 Length=108671 Score = 246 bits (272), Expect = 3e-63 Identities = 159/173 (92%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60 |||| |||||||||||| || |||||||||||||||||||||| ||||||||| | ||| Sbjct 62345 TGCTCACCAACATCGCCGGCTTGATGGACAAGGAAGGCAAGGTCTTGACCGGCCT-GACG 62403 Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAG 120 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62404 ACCCAGCAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAG 62463 Query 121 ATCCGTTGCGCACTGGAAGCAGTGCAAGGCGGCGTGGGCAGCTCGCTGATCCT 173 ||||| ||||| |||||||| |||||||||||||| ||||||||| ||||||| Sbjct 62464 ATCCGCTGCGCGCTGGAAGCGGTGCAAGGCGGCGTTGGCAGCTCGTTGATCCT 62516 >seq116 Length=97025 Score = 86.0 bits (94), Expect = 7e-15 Identities = 106/141 (75%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60 |||||||||||| | | || || ||||||||| |||||| || || | || | | | Sbjct 4570 TGCTGACCAACACCCCGGGCGTGCTGGACAAGGCGGGCAAGCTGCTGCGCAGCCT-GTCG 4512 Query 61 ACGCA-ACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAA 119 | || || | | ||||| ||| ||||||||||||| |||| |||||||||||||| || Sbjct 4511 GCCCAGACCA-TCGACGAACTGTTCGCCGACGGCACGATCTCGGGCGGCATGCTGCCCAA 4453 Query 120 GATCCGTTGCGCACTGGAAGC 140 |||| | ||| ||||| || Sbjct 4452 GATCTCGTCCGCGCTGGACGC 4432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534346537121