Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq411 378 1e-102 seq59 219 7e-55 seq9 161 2e-37 seq2133 129 9e-28 >seq411 Length=42130 Score = 378 bits (418), Expect = 1e-102 Identities = 255/284 (90%), Gaps = 1/284 (0%) Strand=Plus/Plus Query 1 TACGCCTTGCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCT 60 |||||| |||||||||||||||||||||| |||||||| || |||| | | || ||||| Sbjct 351 TACGCCCTGCGGCCGCTGGATTTCGCGGTATTCCCGACC-ATCCTGCTGATCGCCACCCT 409 Query 61 GCTACGTCTGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGG 120 ||| || ||||| | ||||| || ||||| ||||||||||||||||||||||||||||| Sbjct 410 GCTGCGGCTGGCGCTTAACGTGGCTTCCACCCGGGTGGTGATGCTCCACGGCCAGGACGG 469 Query 121 CCATGCCGCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTA 180 ||| ||||| || || ||||||||||||||||| || ||||||||||||||||||||||| Sbjct 470 CCACGCCGCCGCGGGCAAGGTGATCCAGGCCTTTGGCGAGGTGGTGATCGGCGGTAACTA 529 Query 181 CGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAA 240 |||||||||||||||||| || |||||| |||||||||||||||| ||||| |||||||| Sbjct 530 CGTGGTCGGTATCGTGGTTTTTGCGATCTTGATGATCATCAACTTCGTGGTCGTGACCAA 589 Query 241 GGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 ||||||||||||||||||||||||||||||||| |||||||||| Sbjct 590 GGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGTTTTACCCTCG 633 >seq59 Length=142688 Score = 219 bits (242), Expect = 7e-55 Identities = 215/275 (78%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 9 GCGGCCGCTGGATTTCGCGGTGTTCCCGA-CGTATTCTGCAGGTGGCGACCCTGCTACGT 67 ||| |||||||| ||| | | ||||||| ||| |||| | | | ||| |||| || Sbjct 36718 GCGCCCGCTGGACTTCACCATCTTCCCGATCGTG--CTGCTGATCACCACCATGCTGCGG 36661 Query 68 CTGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCC 127 ||||| ||||||| |||||||| || ||| | ||||| |||||||| ||||||| | Sbjct 36660 CTGGCGCTGAACGTGGCCTCCACCCGCGTGATCCTGCTCAACGGCCAGAACGGCCACGAG 36601 Query 128 GCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTC 187 || || || ||||||||| || ||||||||| | ||||||||||| ||||||| |||| Sbjct 36600 GCGGCGGGCAAGGTGATCGCCGCGTTCGGTGAGTTCGTGATCGGCGGCAACTACGCGGTC 36541 Query 188 GGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCC 247 || |||||||||||||| ||||||| ||||||||||| |||||| | |||||||| ||| Sbjct 36540 GGCATCGTGGTGTTCGCCATCCTGACCATCATCAACTTCGTGGTGATCACCAAGGGTGCC 36481 Query 248 GGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCT 282 ||||| | ||||| || | ||| || || | ||| Sbjct 36480 GGGCGCGTGTCCGAAGTAACCGCCCGCTTCATCCT 36446 >seq9 Length=436544 Score = 161 bits (178), Expect = 2e-37 Identities = 199/271 (73%), Gaps = 1/271 (0%) Strand=Plus/Plus Query 12 GCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTCTGG 71 ||||||||| || || | || ||| || | |||| | | || || ||||| || ||| Sbjct 152608 GCCGCTGGACTTTGCCGCCTTTCCGGCGG-TGCTGCTGTTCGCCACGCTGCTGCGCCTGT 152666 Query 72 CATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCGCTG 131 | ||||||||||||| || ||||||||| |||| || ||||| ||| | | ||| | Sbjct 152667 CGCTGAACGTCGCCTCGACCCGGGTGGTGCTGCTGCATGGCCACACCGGGCCGGACGCCG 152726 Query 132 CCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTA 191 | || ||||||||| |||||||||| | | || | ||||| |||| || ||||||| Sbjct 152727 CGGGCAAGGTGATCGAGGCCTTCGGCCACTTCCTGGTGGGCGGCAACTTCGCCGTCGGTA 152786 Query 192 TCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCGGGC 251 || | || ||| ||||||| |||||||||||| | || | |||||||| || || | Sbjct 152787 TCATCGTCTTCATCATCCTGACGATCATCAACTTCATCGTCATTACCAAGGGTGCGGGCC 152846 Query 252 GGATTTCCGAGGTGAGCGCGCGGTTTACCCT 282 | || |||| || ||||||| || ||||| Sbjct 152847 GCATCGCCGAAGTCGGCGCGCGCTTCACCCT 152877 >seq2133 Length=4177 Score = 129 bits (142), Expect = 9e-28 Identities = 195/276 (71%), Gaps = 1/276 (0%) Strand=Plus/Minus Query 9 GCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTC 68 ||| ||||| |||||| ||| ||| |||||| | |||| | | || ||| || | || | Sbjct 3178 GCGCCCGCTCGATTTCTCGGCGTTTCCGACGG-TGCTGCTGATTGCCACCATGATGCGCC 3120 Query 69 TGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCG 128 || | | ||| |||| | || || || | | ||||||| | || ||| |||||| Sbjct 3119 TGTCGCTCAACATCGCGACAACCCGCGTCATCCTCACCCACGGCGATGAAGGCTATGCCG 3060 Query 129 CTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCG 188 | ||||| |||||||||| | ||| || | || || ||||| ||| ||| ||| Sbjct 3059 CCGCCGGGCAGGTGATCCACGGTTTCTCCCAGTTCGTTATGGGCGGCGACTTCGTCATCG 3000 Query 189 GTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCG 248 | ||||||| || || |||||||| ||| |||| || | || | |||||||||||| Sbjct 2999 GCCTCGTGGTCTTTGCCATCCTGATCATCGTCAATTTCCTCGTCATCACCAAGGGCGCCA 2940 Query 249 GGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 ||| || | || || |||||||||| || |||| Sbjct 2939 CGCGCATCGCGGAAGTCGGCGCGCGGTTCACGCTCG 2904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 809519005339