Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01002062.1 Length=351 Score E Sequences producing significant alignments: (Bits) Value seq889 336 4e-90 >seq889 Length=47983 Score = 336 bits (372), Expect = 4e-90 Identities = 296/369 (80%), Gaps = 20/369 (5%) Strand=Plus/Plus Query 1 ACCAGGTCACCATCGTCGGCGCCGAATGCCGACCACGGTGCCGGTGTACCAGCGGGGTGA 60 |||||||| || ||||| ||||||| ||| |||||||||||||| ||||||||||||| Sbjct 38439 ACCAGGTCGCCGTCGTCAGCGCCGA-TGCTCACCACGGTGCCGGTC-ACCAGCGGGGTGA 38496 Query 61 TTTCCACCACGTCGCCGTTCACATAGGCGTCATCGGTGCTTTCATTGAAGCGCCCGTAGA 120 |||||||||||| |||||| || |||||||| ||||||||||| ||||||| || || | Sbjct 38497 TTTCCACCACGTTGCCGTTGACGTAGGCGTCGTCGGTGCTTTCGCTGAAGCGACCATACA 38556 Query 121 ACTCATACCAGGCCCACACGCCCACCACACTGAGGATGACGATCAGCGCCAGGCCGATCA 180 | || ||||| |||||||||||| | | ||||||||||||||||||||| | | || Sbjct 38557 ATTCGTACCAACCCCACACGCCCAAGGCGCCGAGGATGACGATCAGCGCCAGCACAAACA 38616 Query 181 GCATCACTTTGCGTTTGCGCGGGTTGGTGTCTTTGGGTTGTTCGGTC------------- 227 |||| ||||||||||||||||| ||| || ||||||||||| | | Sbjct 38617 GCATGACTTTGCGTTTGCGCGGATTGCTGGTGTTGGGTTGTTCAGCCTTGTTTGTTTCAG 38676 Query 228 --GCGTTGGTGCT---TTCGGCAGTGGCCATGACAAATACCTCAAATTATTCCGTGCGTG 282 |||||| |||| |||||||||||||||||||| ||||| |||||||| ||||| | Sbjct 38677 GAGCGTTGTTGCTGGTTTCGGCAGTGGCCATGACAAGTACCTTGAATTATTCAGTGCGCG 38736 Query 283 TTGCGGGGGTGGTCGCGGCCACGCTGTTGGCGTGATACCCGCCACCCAGGGCCTGCATCA 342 | || |||||||||| ||||||| | | |||||| | ||||| |||||||||||||||| Sbjct 38737 TGGCTGGGGTGGTCGAGGCCACGTTATCGGCGTGGAAACCGCCGCCCAGGGCCTGCATCA 38796 Query 343 ATTGAATCG 351 |||||||| Sbjct 38797 GTTGAATCG 38805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1020694581984