Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq21 176 9e-42 seq8308 156 8e-36 >seq21 Length=10696 Score = 176 bits (194), Expect = 9e-42 Identities = 195/258 (76%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||||| | | ||||| | |||||| |||||||||||||||||||| Sbjct 7482 CTTCTTAGAGGGACTACCCACCTCAAGTGGGGGGAAGTCGGAGGCAATAACAGGTCTGTG 7423 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||| ||||| ||||||||| |||| ||| || | || || || Sbjct 7422 ATGCCCTTAGATACCTTGGGCTGCACGCGCGTTACAATGAAAGCGTGAAAAAGGCTCCCA 7363 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | ||||| ||| | || |||| | | || | || |||| ||||||| || | ||| Sbjct 7362 GCA---CCGGAGGGTGTTGGAAATCATATGAATCACTTTCGTAATGGGGATTGACCTTTG 7306 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||| | || | |||||||||| ||| |||||||| ||||| | | ||||||| | Sbjct 7305 TAATTATCGGTCATAAACGAGGAATTCCTTGTAAGCGCAAGTCATTACCTTGCGTTGAAT 7246 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 7245 ATGTCCCTGCCCTTTGTA 7228 >seq8308 Length=211 Score = 156 bits (172), Expect = 8e-36 Identities = 163/209 (78%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 121 CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAAC 180 |||||||||||||||||||||||| | |||| |||||||||||||||||| | || || | Sbjct 1 CAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGATAAAGTCAGC 60 Query 181 GAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGA 240 | | | | |||| || ||| | ||||| | || || | ||||||| | |||| Sbjct 61 GTG--CGTTTCCTTTCTCGAAAGAGATTGGTAACCA-GTGAATGTTTGTCGTGATTGGGA 117 Query 241 TAGAGCATTGCAATTATTGCTCT-TCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299 | | |||||||||||| ||| | |||||||||| || |||||| | | ||||||| | Sbjct 118 TCGGAAATTGCAATTATT-TTCTGTGAACGAGGAATTCCAAGTAAGTGTGAGTCATCAAC 176 Query 300 ACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||||||||||||||||||||| Sbjct 177 TCGCGCTGATTACGTCCCTGCCCTTTGTA 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947102182656