Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq21 217 5e-54 seq1378 123 8e-26 >seq21 Length=10696 Score = 217 bits (240), Expect = 5e-54 Identities = 172/205 (84%), Gaps = 5/205 (2%) Strand=Plus/Plus Query 211 GTGGTATTTCACTTGCGCCGAA--ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTT 268 |||||||||||| || ||| || ||||||| ||||||||||||| | |||| | Sbjct 3135 GTGGTATTTCAC---CGTCGAGTTACCTCTCCCACCTATTCTACACCTCCCGGGTCACTA 3191 Query 269 CACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAG 328 | ||| || ||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 3192 CGCAATATCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGTAATGGCCAGG 3251 Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388 ||||||||| |||||||||||||||| | |||| ||||||||||||||||||| || | Sbjct 3252 CCCGTTCCCCTGGCTGTGGTTTCGCTGCAACGTAGTTAGGGACAGTGGGAATCTCATTTA 3311 Query 389 TCCATTCATGCGCGTCACTAATTAG 413 ||||||||||||||||||||||||| Sbjct 3312 TCCATTCATGCGCGTCACTAATTAG 3336 Score = 188 bits (208), Expect = 2e-45 Identities = 113/119 (95%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3720 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGTGC 3779 Query 473 TTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 | | |||||| ||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct 3780 TAGATTGAATCTCTTCACATTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAA 3838 Score = 86.0 bits (94), Expect = 2e-14 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||| ||||||| ||||||||||||| | |||| | |||| || | |||||| Sbjct 2867 CTTTAGCTCTACGTGAGATTTCTGTTCCCACTGAGCCTGCCTTTGGTCGTGGCCGTTATT 2926 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2927 TTTTAAGCCGCGTGCCGCCCCAGCCAAACTCCCCACCTGAAAATGTC 2973 >seq1378 Length=6795 Score = 123 bits (136), Expect = 8e-26 Identities = 74/78 (95%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 16 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGTGC 75 Query 473 TTGGTTGAATTTCTTCAC 490 | | |||||| ||||||| Sbjct 76 TAGATTGAATCTCTTCAC 93 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635031132896