Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq21 277 5e-72 seq7315 273 7e-71 >seq21 Length=10696 Score = 277 bits (306), Expect = 5e-72 Identities = 361/489 (74%), Gaps = 33/489 (7%) Strand=Plus/Plus Query 38 ATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGC 97 ||||||||||||||||||||| ||||||| | ||||||| |||||||||||||||||||| Sbjct 8484 ATCAGTATTTATTGTCACTACTTCCCCGTATTGGGATTGAGTAATTTGCGCGCCTGCTGC 8543 Query 98 CTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCC 157 ||||| | || ||||| ||| |||||||||| |||||||||||| |||||||| |||||| Sbjct 8544 CTTCCGTAGAAGTGGTCGCCATTTCTCAGGCGCCCTCTCCGGAACCGAACCCTGATTCCC 8603 Query 158 CGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCA--G 215 ||||||||||| |||||||||||||| || | ||||||||||||||||||||||| | Sbjct 8604 CGTTACCCGTTACAACCATGGTAGGCCAATACCGTACCATCGAAAGTTGATAGGGCAGTG 8663 Query 216 AAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCA 275 | | || ||||| | | ||| || | |||| | || ||||| || ||| Sbjct 8664 ACACTT---TGAAC--TTGTCGGAATAA--AATTCCGATCAGCAAAATTATTCGGATTCA 8716 Query 276 CCAAGGAGCCCCGAAGGGCGTTGGTTTTTTA---TCTAATAAATACA-------CCCCTT 325 | | | | || ||| | |||||| | | ||||| | || | || Sbjct 8717 AC-ACAAACTCCTAAGAG-GTTGGTAGCAAAAGCTAAAATAATTGCAAAGGCTCGCGGTT 8774 Query 326 CCGAAGTCGGGGTTT--TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATG--- 380 | || ||| || |||||||||||| | || |||| ||| |||||| | Sbjct 8775 ACCCGCTCACCCTTTCGTTTGCATGTATTAGC-CCCGATTTACTGCGGATATCCAAGACG 8833 Query 381 --TAGTAAGGTACTA---TCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTC 435 | |||| | | || | || || |||| | ||||||||| | |||||||| Sbjct 8834 CTTTTAAAGGCGCGAAAGTCCATTAGTTTATCACTGTTGTAATGAGCCGTCTGCAGTTTC 8893 Query 436 ACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 495 || ||||| | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8894 ACCGTATA-AAGGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 8952 Query 496 TACTGGCAG 504 ||||||||| Sbjct 8953 TACTGGCAG 8961 >seq7315 Length=390 Score = 273 bits (302), Expect = 7e-71 Identities = 288/374 (77%), Gaps = 5/374 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAA-AAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||| |||||| || || | | || ||||| | || || ||||| | ||||||||| Sbjct 15 GTACCCATTCCGATAACCGGCCTCATTAAGAGAACGGTCTCGTTATTTCTCGTCACTACC 74 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||| | | || || |||||||||||||||||||||||| ||||| || || || ||| | Sbjct 75 TCCTCTTTCCGAGAGTGGGTAATTTGCGCGCCTGCTGCCATCCTTAGACGTAGTGGCCAT 134 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||| || |||||||| |||||||||||||| ||||||||||| | |||||||| Sbjct 135 TTCTCAGGCCCCTTCTCCGGAGTCGAACCCTAATTCTCCGTTACCCGTCAACACCATGGT 194 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || ||| || |||||||||| | |||||| |||||| | | | |||| | ||||||| Sbjct 195 AGTCCAATACACTACCATCGACAATTGATAAGGCAGATACTCGTATGACACGTCGCCGGT 254 Query 240 TCA-AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTG 298 ||| || || |||||| | ||||||||| ||| ||| ||| | | || | || | Sbjct 255 TCATAGACCGTGCGATCAGCTAAGTTATTCTGAGTCAGCAAAACACGACCAAAGCCGCTT 314 Query 299 GTTTTTTATCTAATAAATACACCCCTTCCG--AAGTC-GGGGTTTTTAGCATGTATTAGC 355 | |||| |||||||||| ||| | ||||| | ||| | | ||| |||||||||||| Sbjct 315 GGTTTTGCTCTAATAAATGCACTCTTTCCGCTAGGTCAGAGCTTTAGCGCATGTATTAGC 374 Query 356 TCTAGAATTACCAC 369 |||||||||||||| Sbjct 375 TCTAGAATTACCAC 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510244020992