Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20ellipticum_20[genbank_20GCA_5F900092235.1_202017-01- 02] 10,327 sequences; 62,160,181 total letters Query= NC_031076.1 Length=38071 Score E Sequences producing significant alignments: (Bits) Value seq1940 206 6e-49 seq98 91.5 4e-14 >seq1940 Length=14353 Score = 206 bits (228), Expect = 6e-49 Identities = 265/359 (74%), Gaps = 6/359 (2%) Strand=Plus/Minus Query 34857 GCGAAACCCCTATCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGATATAC-C 34915 |||||||| |||||| | ||||| |||||||| ||||||||||| ||||| || || | Sbjct 12930 GCGAAACCGTCATCACCGTGGTGGGAAACCTCACGGCCGACCCCGAGCTGCGCTACACGC 12871 Query 34916 AATTCGGGCATTGCCG-TCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCG 34974 | ||||| ||||| | || ||||||||| ||||||| || || || | |||||||| Sbjct 12870 AGAACGGGC--TGCCGGTGGCGAACTTCACCATCGCATCGACGCCTCGGAACTTCGACCG 12813 Query 34975 GCAAGCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGC-TCGGTGTGGCGTC 35033 || || || |||||||||||||| || |||||||| || ||| || || ||||| Sbjct 12812 TGCCGCGAATGAGTGGAAGGACGGCGATGCGCTGTTCCT-CCGTGCATCCGTCTGGCGCG 12754 Query 35034 AGCCGGCCGAGAACGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGAC 35093 || |||||| ||||||| | ||| || | ||||||||||| || |||| ||||| | Sbjct 12753 AGTTCGCCGAGCACGTGGCGGGTTCGTTGACGAAGGGCATGCGCGTCATCGCGCAGGGCC 12694 Query 35094 GTCTCCGGGCGCGCAGCTACGACGACCGCGACGGAAACCGTCGCACTGTGATCGGGATCG 35153 |||| || |||| |||| | |||||||| || |||| ||||| | ||||| | | | Sbjct 12693 GTCTGCGTCAGCGCTCCTACCAGGACCGCGAGGGCAACCAGCGCACCGCGATCGAGCTGG 12634 Query 35154 AAGTCGATGACGTGGGCCCGGCGTTGAAGTTTGCCACCGCTACCGTCACCCGCGCCGCC 35212 | ||||| || | ||||| || | || || ||||| |||||||| || ||| Sbjct 12633 AGGTCGACGAGATCGGCCCCTCGCTCCGGTACGCGACCGCGCAGGTCACCCGTGCGGCC 12575 >seq98 Length=166217 Score = 91.5 bits (100), Expect = 4e-14 Identities = 115/152 (76%), Gaps = 7/152 (5%) Strand=Plus/Plus Query 29524 TTCACCGACTGGCGCCAGCTCGCCGCA-ACGACCGACGCAGTGCAGGCAGGCGGCTGGGT 29582 |||||||||||||| ||||| ||||| || || ||||| ||||| | ||||| Sbjct 138493 TTCACCGACTGGCGACAGCT-GCCGCTCACCACTGACGCGCTGCAGTGCGCCGGCTTCAC 138551 Query 29583 GTGGCGCGGTGT-GCTCCCGTGGATCAAGCCCAATGC---GCGCCCGCAGCTCGGGCGCT 29638 ||||||||||| ||| |||| |||| || | | |||||| ||||| ||||||| Sbjct 138552 CTGGCGCGGTGTTGCTGT-GTGGGACAAGACCGAGGGCGTGCGCCCCCAGCTGGGGCGCT 138610 Query 29639 TCACCAACCAGGCCGAGTTCGTCGTGTGGGGA 29670 || |||||||||||||| || ||||||||| Sbjct 138611 TCCGCAACCAGGCCGAGTATGTGGTGTGGGGA 138642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121690674861942