Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq8951 150 3e-34 seq112 86.0 1e-14 >seq8951 Length=1340 Score = 150 bits (166), Expect = 3e-34 Identities = 186/248 (75%), Gaps = 5/248 (2%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATG 131 |||||||||||| |||| | |||| ||||| ||||| ||| ||| | || || ||||| Sbjct 675 TTTTACTTTGAACAAATCAAAGTGCTCAAAACAGGCGTTTTGCTTGTATGTTTTTGCATG 616 Query 132 GAATAATAGAATAGGACGTGCGGTTCTA-TTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||| ||| | |||| ||| |||| ||||||| || || |||||||| Sbjct 615 GAATAATAGAATAAGACTT-CGGT-CTAGTTTTATTGGTTTTATAGATCGTTGTAATGAT 558 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||| || || | |||||| | ||||| || |||||||||||||||||| Sbjct 557 TAAAAGAGACAAACGGGGGCATTCGTATTGTTGCGTGAGAGGTGAAATTCTTGGACCGCA 498 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||| |||| |||||||| || ||||| ||| ||||||||||| |||||||| Sbjct 497 GCAAGACGTCCTACAGCGAAAGCATTTGCCAAGCTTGTCTTCATTAATCA-AGAACGAAA 439 Query 311 GTTAGGGG 318 || || || Sbjct 438 GTCAGAGG 431 >seq112 Length=13817 Score = 86.0 bits (94), Expect = 1e-14 Identities = 172/250 (69%), Gaps = 15/250 (6%) Strand=Plus/Minus Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT--GCTCGAATACATT--AGCATGG 132 ||| ||| |||||| |||||| |||||| || ||| ||| | | || | ||||||| Sbjct 9896 ACTGTGAGAAAATTGTAGTGTTTAAAGCAAGCTTTTATGCTTG--TTCAATGCAGCATGG 9839 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTA----GGACCGCCGTAATG 188 || || |||||||| || ||||||||||| | | |||||| Sbjct 9838 TATGGTAAAATAGGACAC----TTAACATTTGTTGGTTTATCAATTGTTTAAGTGTAATG 9783 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 | ||||||||| |||||||| || |||| | | ||||||||||||| | || Sbjct 9782 ACTAATAGGGAAAGTCGGGGCCGTTCATATTGATGGGCGAGAGGTGAAATTCGTTGACCC 9723 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 | |||| ||||| |||||||| ||| |||| || | | ||||||||| |||||| Sbjct 9722 TATCAAGATGCACTACAGCGAAAGCATTCGGCAAGTATTTCTCCATTAATCA-AGAACGA 9664 Query 309 AAGTTAGGGG 318 ||||| |||| Sbjct 9663 AAGTTTGGGG 9654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914941666496