Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6832 154 6e-35 seq112 136 2e-29 >seq6832 Length=1101 Score = 154 bits (170), Expect = 6e-35 Identities = 112/130 (86%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||| |||||||||||||||||||||||||||| ||| ||||||||| Sbjct 969 AGAGCGTATGCGTTGAGACCCGAAAGATGGTGAACTATGCCTGAGCAGGACGAAGCCAGA 1028 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||| | || | |||||||| ||||||||||||||||| | |||||| Sbjct 1029 GGAAACTCTGGTGGAAGTCCGAATCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGT 1088 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 1089 ATAGGGGCGA 1098 Score = 116 bits (128), Expect = 2e-23 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||||||||| || ||||| | || || |||||| ||| |||| |||||| Sbjct 228 GAGTCGGGTTGTTTGGAAACGCAGCCCAAAGAAGGTGGTAAACTTCACCTAAGACTAAAT 287 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || || |||||||| ||||||| |||| ||||| |||||||||||||| | Sbjct 288 ATCACTACGAATCCGATAGCAAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTTTGAAG 347 Query 160 AGAGAGTTAAAAAGCACGTGAAAT 183 ||||||||||| |||||||||||| Sbjct 348 AGAGAGTTAAAGAGCACGTGAAAT 371 Score = 78.8 bits (86), Expect = 4e-12 Identities = 69/85 (81%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG-TCA 463 || ||||||||| ||||||||||||||||| |||| | || |||||| ||||||| | | Sbjct 786 CGACCCGTCTTGAAACACGGACCAAGGAGTTTAACGTATACGCGAGTCATTGGGTGATAA 845 Query 464 AACCCGTGCGCGTAATGAAAGTGAA 488 |||| ||||||||||||| || Sbjct 846 AACCTAAAGGCGTAATGAAAGTAAA 870 >seq112 Length=13817 Score = 136 bits (150), Expect = 2e-29 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||||||||| ||||||||||||||| | || |||||||| ||||||||||||||| Sbjct 7115 GGACCCGAAAGGGTGTGAACTATGCCTGAGGAAGGCGAAGCCAGGGGAAACTCTGGTGGA 7056 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| | |||| | ||| ||||||||||| ||||| || |||||||||||||||| Sbjct 7055 GGCTTGTAGCGATACTGACGTGCAAATCGTTCGTCTAACTTGGGTATAGGGGCGA 7001 Score = 78.8 bits (86), Expect = 4e-12 Identities = 109/149 (73%), Gaps = 3/149 (2%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| |||||| | |||||| | |||| ||| |||||| | ||| | || || | Sbjct 7881 TTCCACGAGTAGGAATGTTTGAAATTGCAT-TCTGAATGGGTGATAAGACGCATCCAAGG 7823 Query 94 CTAAATATTGGCCAG-AGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 |||||||| | || ||||||||||| ||||||| |||| ||||| || |||| || Sbjct 7822 CTAAATATAAGTTAGGAGACCGATAGCAAACAAGTACTGTGAAGGAAAGGTGCAAAGGAC 7763 Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAA 181 |||| ||| || ||| ||||||| |||| Sbjct 7762 TTTGAAAAAAGGGTT-AAAAGCATTTGAA 7735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079394530850