Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq140 338 2e-90 seq103 260 4e-67 seq554 172 1e-40 seq26954 93.3 1e-16 seq5 86.0 2e-14 >seq140 Length=166553 Score = 338 bits (374), Expect = 2e-90 Identities = 317/401 (79%), Gaps = 2/401 (0%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| |||| |||||||||| |||||||||||||||||||||||| |||| || |||||| Sbjct 4352 AGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTT 4293 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||| ||||||||||||||||| || |||||| |||| |||| ||||||||| Sbjct 4292 GTTCGGATTTACTGGGCGTAAAGCGCACGTAGGCGGACTATTAAGTCAGGGGTGAAATCC 4233 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | ||||| |||| |||| ||| |||| |||| | || |||| | ||||| | || Sbjct 4232 CGGGGCTCAACCCCGGAACTGCCTTTGATACTGGTAGTCTTGAGTTCGAGAGAGGTGAGT 4173 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| ||||||| ||||||||| |||||||||||| |||||||||| Sbjct 4172 GGAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGGAACACCAGTGGCGAAGGC 4113 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 || | |||| | ||||||||| | | ||||||||||||||||||||||||||||| Sbjct 4112 GGCTCACTGGCTCGATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGA 4053 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATT-TACTTCCTTG 368 ||||||||||||||||||| ||||| || | |||| || ||| | | |||| | | Sbjct 4052 TACCCTGGTAGTCCACGCCGTAAACTATGAGAGCTAGCCGTCGGGCAGTATACTGT-TCG 3994 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || ||| ||||| | ||| | ||||||||||| ||| Sbjct 3993 GTGGCGCAGCAAACGCATTAAGCTCTCCGCCTGGGGAGTAC 3953 >seq103 Length=5517 Score = 260 bits (288), Expect = 4e-67 Identities = 307/412 (75%), Gaps = 4/412 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| | ||||||| | ||||||||| |||||||||||||||||||||||| ||| | | Sbjct 793 TACCGAAGGAATAAGGATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCC 852 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||| ||| |||| ||||| ||||| |||||| | |||| |||| || Sbjct 853 AAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTTATTAAGTCAGGGGT 912 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGA-CTAGAGTGTGTCAG 181 |||| | |||| |||| | | ||| ||| |||| | || || || | || Sbjct 913 GAAAGACGGTGGCTCAACCATCGCAGTGCCCTTGATACTG-ATGAGCTTGAATACACTAG 971 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 ||| || ||||| || ||||| ||||||||| ||||||||| ||||||| || Sbjct 972 AGGTAGGCGGAATGTGACAAGTAGCGGTGAAATGCATAGATATGTCACAGAACACCGATT 1031 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 ||||||||||| || | | | ||||||| | ||||||||||||||||| |||||| Sbjct 1032 GCGAAGGCAGCTTACTATGGTGTTATTGACGCTGAGGCACGAAAGCGTGGGGATCAAACA 1091 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC 361 |||||||||||||||||||||||||||||||||||| ||| | |||| | ||| ||| Sbjct 1092 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGAATACTCGCTGTTAGCGATATAC 1151 Query 362 TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATACTCCC 413 || | | ||| || |||| |||| || |||||||| ||| ||| Sbjct 1152 --AGTTAGCGGCTAAGCGAAAGCGTTAAGTATTCCACCTGGGGAGTACGCCC 1201 >seq554 Length=647 Score = 172 bits (190), Expect = 1e-40 Identities = 133/158 (84%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 74 GGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGG 133 ||||||||||||||||||||||||| ||| |||||| |||| | | ||||||| ||| || Sbjct 490 GGAATTACTGGGCGTAAAGCGTGCGTAGGTGGTTGTTTAAGTCTGTTGTGAAAGCCCTGG 549 Query 134 GCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAA 193 ||| ||||||||||||||| | | |||| | ||||||||||| |||||| |||||| Sbjct 550 GCTCAACCTGGGAATTGCAGTGGATACTGGGCAACTAGAGTGTGGTAGAGGGTAGTGGAA 609 Query 194 TTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGG 231 |||| |||||||||||||||||||||| || ||||| Sbjct 610 TTCCCGGTGTAGCAGTGAAATGCGTAGAGATCGGGAGG 647 >seq26954 Length=321 Score = 93.3 bits (102), Expect = 1e-16 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 281 CGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATC 340 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| || || Sbjct 257 CGAAAGCGTGGGGTGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACAATGTC 316 Query 341 AACT 344 ||| Sbjct 317 GACT 320 >seq5 Length=11203 Score = 86.0 bits (94), Expect = 2e-14 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 263 AACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTC 322 || ||||||||| | | |||||||| | ||||||||||||||||||| |||||||||||| Sbjct 3166 AATACTGACGCTGAGGTACGAAAGCATAGGGAGCAAACAGGATTAGAGACCCTGGTAGTC 3107 Query 323 CACGCCCTAAACGAT 337 | || |||||||| Sbjct 3106 TATGCAGTAAACGAT 3092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289235984608